RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 DENND5AQ6IQ26 1287 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 MICALL1Q8N3F8 863 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 PPM1EQ8WY54 764 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 MYEOVQ96EZ4 313 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 CLSTN3Q9BQT9 956 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 FICDQ9BVA6 458 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 CAPN7Q9Y6W3 813 aa19.94■□□□□ 0.78
HDAC1-201ENST00000373548 J3KR12 359 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TPP1O14773 563 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 SEC24AO95486 1093 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TOP3BO95985 862 aaKnown RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 BGNP21810 368 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 NMBRP28336 390 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 ADRA1AP35348 466 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TUFMP49411 452 aaKnown RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 KCNQ1P51787 676 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 KIAA1841Q6NSI8 718 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 CIR1Q86X95 450 aaPredicted RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 ARMC2Q8NEN0 867 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 ACMSDQ8TDX5 336 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 FATE1Q969F0 183 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 CEP295NLQ96MC4 621 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 BEGAINQ9BUH8 593 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 KIFC1Q9BW19 673 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 DONSONQ9NYP3 566 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TXNDC16Q9P2K2 825 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 HNRNPDQ14103 355 aaKnown RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TEDDM1Q5T9Z0 273 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF778Q96MU6 729 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 RPRD1AQ96P16 312 aaPredicted RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 PPP1R2P1Q96PQ5 205 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 AGAP2Q99490 1192 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 TMEM39AQ9NV64 488 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 SLC12A4Q9UP95 1085 aa19.93■□□□□ 0.78
HDAC1-201ENST00000373548 HBS1LQ9Y450 684 aaKnown RBP19.93■□□□□ 0.78
HDAC1-201ENST00000373548 MIA3Q5JRA6 1907 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 PMPCBO75439 489 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 NEBLO76041 1014 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 UBOX5O94941 541 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 KPNA1P52294 538 aaPredicted RBP19.92■□□□□ 0.78
HDAC1-201ENST00000373548 HSP90AA5PQ58FG0 334 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 GRTP1Q5TC63 336 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 TMCO2Q7Z6W1 182 aaPredicted RBP19.92■□□□□ 0.78
HDAC1-201ENST00000373548 KCNMB4Q86W47 210 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 HAUS2Q9NVX0 235 aa19.92■□□□□ 0.78
HDAC1-201ENST00000373548 AFF4Q9UHB7 1163 aaKnown RBP19.92■□□□□ 0.78
HDAC1-201ENST00000373548 PDE1CQ14123 709 aaPredicted RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 GALNTL6Q49A17 601 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 FAM133BQ5BKY9 247 aaKnown RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 ACBD5Q5T8D3 534 aaPredicted RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 FITM2Q8N6M3 262 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 C10orf82Q8WW14 230 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 TOP1MTQ969P6 601 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 MRGPRX2Q96LB1 330 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 RBBP8Q99708 897 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 MECRQ9BV79 373 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 TSSK1BQ9BXA7 367 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 RASSF4Q9H2L5 321 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 C20orf96Q9NUD7 363 aaPredicted RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 DNMT3LQ9UJW3 386 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SOD2P04179 222 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 GSTA1P08263 222 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 F7P08709 466 aaPredicted RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 NEFHP12036 1026 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 HMGA1P17096 107 aaKnown RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 TACR2P21452 398 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 ATP5C1P36542 298 aaKnown RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 RENBPP51606 427 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 PDE1BQ01064 536 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SLC10A7Q0GE19 358 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 PCID2Q5JVF3 399 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SPOUT1Q5T280 376 aaKnown RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SNX30Q5VWJ9 437 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 STRA8Q7Z7C7 330 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 ANKLE1Q8NAG6 615 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 PSMG2Q969U7 264 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF512Q96ME7 567 aaPredicted RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 KLHL5Q96PQ7 755 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 CDK5RAP1Q96SZ6 601 aaKnown RBP19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SLC25A51Q9H1U9 297 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 SP110Q9HB58 689 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 RXFP1Q9HBX9 757 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 ENTPD7Q9NQZ7 604 aa19.91■□□□□ 0.78
HDAC1-201ENST00000373548 CCDC78A2IDD5 438 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 ABLIM3O94929 683 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 GJB5O95377 273 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 POU6F1Q14863 301 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 FAM117BQ6P1L5 589 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 PKN3Q6P5Z2 889 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 KDELC1Q6UW63 502 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 RANBP10Q6VN20 620 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 PDZD8Q8NEN9 1154 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF461Q8TAF7 563 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 AZIN2Q96A70 460 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF689Q96CS4 500 aaPredicted RBP19.9■□□□□ 0.78
HDAC1-201ENST00000373548 NT5MQ9NPB1 228 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 USH1CQ9Y6N9 552 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 CHD5Q8TDI0 1954 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 ZNF840PA6NDX5 716 aa19.9■□□□□ 0.78
HDAC1-201ENST00000373548 KLF11O14901 512 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms