RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 EPC2Q52LR7 807 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TTC27Q6P3X3 843 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TAS2R42Q7RTR8 314 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TICAM1Q8IUC6 712 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ELMOD2Q8IZ81 293 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 SLC15A4Q8N697 577 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TMEM161BQ8NDZ6 487 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF420Q8TAQ5 688 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TTC9Q92623 222 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 MFSD3Q96ES6 412 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 C12orf42Q96LP6 360 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CCDC77Q9BR77 488 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 INO80BQ9C086 356 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ABI2Q9NYB9 513 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 NINJ2Q9NZG7 142 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 FZD1Q9UP38 647 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 C19orf81C9J6K1 198 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 H7C0C1 242 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 AREL1O15033 823 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 PMM2O15305 246 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TYROBPO43914 113 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 NUAK1O60285 661 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 LRRN2O75325 713 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 GPC4O75487 556 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RGS20O76081 388 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ATE1O95260 518 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TBXAS1P24557 533 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RPA3P35244 121 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 NPTX2P47972 431 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 GBE1Q04446 702 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TMED2Q15363 201 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 STK11Q15831 433 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CYP1B1Q16678 543 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 SMU1Q2TAY7 513 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ANO4Q32M45 955 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 C10orf62Q5T681 223 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ANGEL2Q5VTE6 544 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CENPUQ71F23 418 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ADAT2Q7Z6V5 191 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RNF180Q86T96 592 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ADAMTSL2Q86TH1 951 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 IGFN1Q86VF2 1251 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 LSRQ86X29 649 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 KIAA2013Q8IYS2 634 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF276Q8N554 614 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RFFLQ8WZ73 363 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TRIB2Q92519 343 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 KRT35Q92764 455 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TANKQ92844 425 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 YME1L1Q96TA2 773 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 NMUR2Q9GZQ4 415 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TRABDQ9H4I3 376 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RPF2Q9H7B2 306 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 UBE2TQ9NPD8 197 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 SFMBT1Q9UHJ3 866 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TBX20Q9UMR3 447 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 BRCA1P38398 1863 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 NCANO14594 1321 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 A0A1B0GTW7 788 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ATP2A1O14983 1001 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 POLR1CO15160 346 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ACOX3O15254 700 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 THAP12O43422 761 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 KLHL41O60662 606 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ARHGEF15O94989 841 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 STBD1O95210 358 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 H6PDO95479 791 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 GGPS1O95749 300 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ENO1P06733 434 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 DLDP09622 509 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 TNFAIP3P21580 790 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 GABRB3P28472 473 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 GNL1P36915 607 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 PIK3CAP42336 1068 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 GALNT2Q10471 571 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 OVGP1Q12889 678 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 DMP1Q13316 513 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 TMEM132BQ14DG7 1078 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ANKRD26P1Q6NSI1 321 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 CCDC137Q6PK04 289 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 TDRPQ86YL5 185 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 MAP4K3Q8IVH8 894 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 BRSK2Q8IWQ3 736 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 SAMD14Q8IZD0 417 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 BBOF1Q8ND07 529 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 SLC35G2Q8TBE7 412 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 MARVELD3Q96A59 401 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ZUFSPQ96AP4 578 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 NLRP4Q96MN2 994 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 NTPCRQ9BSD7 190 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 KIFC3Q9BVG8 833 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms