RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 FDX1P10109 184 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 CYP4B1P13584 511 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 TPH1P17752 444 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MGAT1P26572 445 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SOX10P56693 466 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 CD83Q01151 205 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MAMLD1Q13495 774 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 IKBKEQ14164 716 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MGAT5BQ3V5L5 792 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 AASDHQ4L235 1098 aaPredicted RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PLEKHM3Q6ZWE6 761 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 CDKL3Q8IVW4 592 aaPredicted RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 FAM162AQ96A26 154 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 KCTD14Q9BQ13 255 aaPredicted RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 RIBC2Q9H4K1 309 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PAQR5Q9NXK6 330 aaPredicted RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 GABBR1Q9UBS5 961 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 AGO2Q9UKV8 859 aaKnown RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MYPNQ86TC9 1320 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 NCAM1P13591 858 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 ERCC2P18074 760 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 FBXO30Q8TB52 745 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 ENKURQ8TC29 256 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 ACAT2Q9BWD1 397 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SNTG2Q9NY99 539 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 OAZ3Q9UMX2 235 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 GAKO14976 1311 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SDR42E2A6NKP2 422 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MED7O43513 233 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SNAP91O60641 907 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 HUS1O60921 280 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 RSL1D1O76021 490 aaKnown RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 NUMBP49757 651 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 KCNK10P57789 538 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MERTKQ12866 999 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PRKAA1Q13131 559 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 DENND5AQ6IQ26 1287 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 ARHGAP36Q6ZRI8 547 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 HDDC2Q7Z4H3 204 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 IGFN1Q86VF2 1251 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 ARMC8Q8IUR7 673 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 UBR7Q8N806 425 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 RXFP2Q8WXD0 754 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 NSMCE2Q96MF7 247 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 GBA3Q9H227 469 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 IFT80Q9P2H3 777 aaPredicted RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PCDHGC3Q9UN70 934 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 TMEM63AO94886 807 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 GRIA4P48058 902 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PMS2P3Q13401 168 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 LSM12Q3MHD2 195 aaKnown RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 LRRC49Q8IUZ0 686 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 TBC1D21Q8IYX1 336 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 RAB2BQ8WUD1 216 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 CHURC1Q8WUH1 139 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 IFT43Q96FT9 208 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 MAELQ96JY0 434 aaKnown RBP11.95□□□□□ -0.5
PTPN1-201ENST00000371621 FEM1AQ9BSK4 669 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 EXD2Q9NVH0 621 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 SLC27A5Q9Y2P5 690 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
PTPN1-201ENST00000371621 CXorf49A8MYA2 514 aaPredicted RBP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 EVPLLA8MZ36 301 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 FAM20BO75063 409 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 QARSP47897 775 aaKnown RBP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 SNAP47Q5SQN1 464 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ARHGEF16Q5VV41 709 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 GPR180Q86V85 440 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ELOVL6Q9H5J4 265 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 SP140LQ9H930 580 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 NCKIPSDQ9NZQ3 722 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 LOC110117498-PIK3R3F6TDL0 507 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 AQP9O43315 295 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 PTPN7P35236 360 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 GRK3P35626 688 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 SOX6P35712 828 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 GMPRP36959 345 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 DPYSQ14117 519 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 CSHL1Q14406 222 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 CAMKK1Q8N5S9 505 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 CDK5RAP1Q96SZ6 601 aaKnown RBP11.94□□□□□ -0.5
PTPN1-201ENST00000371621 ZNF696Q9H7X3 374 aa11.94□□□□□ -0.5
PTPN1-201ENST00000371621 EML4Q9HC35 981 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms