RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 DUOXA1Q1HG43 343 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 ERMARDQ5T6L9 678 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 BSPRYQ5W0U4 402 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 MSANTD2Q6P1R3 559 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 RABEPKQ7Z6M1 372 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 KIAA0907Q7Z7F0 614 aaPredicted RBP15.36■□□□□ 0.05
LMO4-201ENST00000370542 DENND1CQ8IV53 801 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 RASGEF1CQ8N431 466 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 TFAP2BQ92481 460 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 NDRG1Q92597 394 aaKnown RBP15.36■□□□□ 0.05
LMO4-201ENST00000370542 TLCD1Q96CP7 247 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 PGM2Q96G03 612 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 ZSWIM1Q9BR11 485 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 ABCC13Q9NSE7 274 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 SAMD15Q9P1V8 674 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 USP36Q9P275 1121 aaKnown RBP15.36■□□□□ 0.05
LMO4-201ENST00000370542 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 CLEC4EQ9ULY5 219 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 SLC6A14Q9UN76 642 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 UTP11Q9Y3A2 253 aaKnown RBP15.36■□□□□ 0.05
LMO4-201ENST00000370542 MSRB2Q9Y3D2 182 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 STON1Q9Y6Q2 735 aa15.36■□□□□ 0.05
LMO4-201ENST00000370542 SLC12A8A0AV02 714 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 TIMM44O43615 452 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ATP6V1G2O95670 118 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 IGLV3-19P01714 112 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 SERPINF2P08697 491 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 NUDT17P0C025 328 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ENGP17813 658 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 IL12RB1P42701 662 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 RPL34P49207 117 aaKnown RBP15.35■□□□□ 0.05
LMO4-201ENST00000370542 DAOAP59103 153 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ELF3P78545 371 aaPredicted RBP15.35■□□□□ 0.05
LMO4-201ENST00000370542 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
LMO4-201ENST00000370542 ADIGQ0VDE8 80 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 E2F5Q15329 346 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 TMEM215Q68D42 235 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 PIP4P1Q86T03 277 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 PROSER1Q86XN7 944 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 IRGQQ8WZA9 623 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 BHMTQ93088 406 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 MKRN2Q9H000 416 aaKnown RBP15.35■□□□□ 0.05
LMO4-201ENST00000370542 LRRC4Q9HBW1 653 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 HAUS2Q9NVX0 235 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ELOVL2Q9NXB9 296 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 NOP53Q9NZM5 478 aaKnown RBP15.35■□□□□ 0.05
LMO4-201ENST00000370542 CNTN6Q9UQ52 1028 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 RAD54BQ9Y620 910 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
LMO4-201ENST00000370542 CCDC189A1A4V9 331 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 ZBTB24O43167 697 aaPredicted RBP15.34■□□□□ 0.05
LMO4-201ENST00000370542 BUB1O43683 1085 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 PPFIA2O75334 1257 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 IGLV3-27P01718 113 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 CYBBP04839 570 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 HMBSP08397 361 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 HOXD9P28356 352 aaPredicted RBP15.34■□□□□ 0.05
LMO4-201ENST00000370542 DRG2P55039 364 aaKnown RBP15.34■□□□□ 0.05
LMO4-201ENST00000370542 GCNT1Q02742 428 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 SEMA3BQ13214 749 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 STILQ15468 1287 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 FUT11Q495W5 492 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 MPPE1Q53F39 396 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 ADGRF1Q5T601 910 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 PMF1Q6P1K2 205 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 C19orf48Q6RUI8 117 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 TRIM59Q8IWR1 403 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMO4-201ENST00000370542 ARMC2Q8NEN0 867 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 UBA3Q8TBC4 463 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 UCMAQ8WVF2 138 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 UBLCP1Q8WVY7 318 aaPredicted RBP15.34■□□□□ 0.05
LMO4-201ENST00000370542 DNASE2BQ8WZ79 361 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 AZIN2Q96A70 460 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 MS4A14Q96JA4 679 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 HSFY1Q96LI6 401 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 RUNDC3BQ96NL0 473 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 NT5C1BQ96P26 610 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 TMEM109Q9BVC6 243 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 NOD2Q9HC29 1040 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 CD93Q9NPY3 652 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMO4-201ENST00000370542 WSB2Q9NYS7 404 aaPredicted RBP15.34■□□□□ 0.05
LMO4-201ENST00000370542 CYP8B1Q9UNU6 501 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMO4-201ENST00000370542 SLC12A4Q9UP95 1085 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 UNC79Q9P2D8 2635 aa15.34■□□□□ 0.05
LMO4-201ENST00000370542 BUB1BO60566 1050 aaPredicted RBP15.33■□□□□ 0.04
LMO4-201ENST00000370542 RTN2O75298 545 aa15.33■□□□□ 0.04
LMO4-201ENST00000370542 AGTP01019 485 aa15.33■□□□□ 0.04
LMO4-201ENST00000370542 NCAM1P13591 858 aa15.33■□□□□ 0.04
LMO4-201ENST00000370542 CD19P15391 556 aa15.33■□□□□ 0.04
LMO4-201ENST00000370542 CCND1P24385 295 aa15.33■□□□□ 0.04
LMO4-201ENST00000370542 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms