RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PTPN13Q12923 2485 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 TRIM49BA6NDI0 452 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 TCAF2A6NFQ2 919 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 CDRT15L2A8MXV6 281 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 KCNU1A8MYU2 1149 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 K7ERQ8 282 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 RAD51BO15315 384 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 SLC16A3O15427 465 aaKnown RBP15.79■□□□□ 0.12
SSR4-204ENST00000370087 ALPPL2P10696 532 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 ZNF18P17022 549 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 HNRNPA2B1P22626 353 aaKnown RBP15.79■□□□□ 0.12
SSR4-204ENST00000370087 AKT2P31751 481 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 PRCPP42785 496 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 GPD2P43304 727 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 PDX1P52945 283 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 NUCB2P80303 420 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 FZD2Q14332 565 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 FBXL22Q6P050 247 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 KRBA2Q6ZNG9 492 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 Q6ZSR6 202 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 EFL1Q7Z2Z2 1120 aaKnown RBP15.79■□□□□ 0.12
SSR4-204ENST00000370087 PTAR1Q7Z6K3 402 aaPredicted RBP15.79■□□□□ 0.12
SSR4-204ENST00000370087 CHST14Q8NCH0 376 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 BMFQ96LC9 184 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 PSMB7Q99436 277 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 ABCG4Q9H172 646 aa15.79■□□□□ 0.12
SSR4-204ENST00000370087 SYNJ2BP-COX16A0A087WUM0 186 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 POM121BA6NF01 834 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 E5RJQ4 531 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 KPNA3O00505 521 aaPredicted RBP15.78■□□□□ 0.12
SSR4-204ENST00000370087 EFSO43281 561 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 SNAP91O60641 907 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 SRCP12931 536 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 FMO5P49326 533 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 NFKB2Q00653 900 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 STILQ15468 1287 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 PERM1Q5SV97 790 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 FOXR1Q6PIV2 292 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 BEND5Q7L4P6 421 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 RRAGAQ7L523 313 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 PPM1KQ8N3J5 372 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 OR2A12Q8NGT7 310 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 NT5C1BQ96P26 610 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 COX16Q9P0S2 106 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 SCN8AQ9UQD0 1980 aa15.78■□□□□ 0.12
SSR4-204ENST00000370087 CPED1A4D0V7 1026 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 A6NNZ2 444 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 SMAD6O43541 496 aaKnown RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 RBMS1P29558 406 aaKnown RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 CHRNA3P32297 505 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 DUSP3P51452 185 aaPredicted RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 NFATC3Q12968 1075 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 SRSF6Q13247 344 aaKnown RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 AUHQ13825 339 aaKnown RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 DEFB133Q30KQ1 61 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 TTC39BQ5VTQ0 682 aaPredicted RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 ZCCHC8Q6NZY4 707 aaKnown RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 ATP6V0D2Q8N8Y2 350 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 IFT43Q96FT9 208 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 KREMEN1Q96MU8 473 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 RPRD1AQ96P16 312 aaPredicted RBP15.77■□□□□ 0.12
SSR4-204ENST00000370087 SLC4A5Q9BY07 1137 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 FAM204AQ9H8W3 233 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 USP29Q9HBJ7 922 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 POPDC2Q9HBU9 364 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 VPS28Q9UK41 221 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
SSR4-204ENST00000370087 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 SPINT1O43278 529 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 SART1O43290 800 aaKnown RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 PCDH8O95206 1070 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 NME1P15531 152 aaKnown RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 RRM1P23921 792 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 SRSF1Q07955 248 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSR4-204ENST00000370087 ZNF177Q13360 481 aaPredicted RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 PNOCQ13519 176 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 LINC00303Q3SY05 128 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 RABGAP1LQ5R372 815 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 NEK5Q6P3R8 708 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 KYAT3Q6YP21 454 aaKnown RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 CCDC81Q6ZN84 652 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 CLEC14AQ86T13 490 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 GRIN3AQ8TCU5 1115 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 DUSP23Q9BVJ7 150 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 ACP6Q9NPH0 428 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 ARMCX3Q9UH62 379 aaPredicted RBP15.76■□□□□ 0.11
SSR4-204ENST00000370087 HS3ST2Q9Y278 367 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 PCDHGA8Q9Y5G5 932 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 HS3ST4Q9Y661 456 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 SPTA1P02549 2419 aa15.76■□□□□ 0.11
SSR4-204ENST00000370087 NEMP2A6NFY4 417 aa15.75■□□□□ 0.11
SSR4-204ENST00000370087 CNTN5O94779 1100 aa15.75■□□□□ 0.11
SSR4-204ENST00000370087 TNFSF15O95150 251 aa15.75■□□□□ 0.11
SSR4-204ENST00000370087 CSF2P04141 144 aa15.75■□□□□ 0.11
SSR4-204ENST00000370087 CSRP3P50461 194 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms