RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SRCP12931 536 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 MX2P20592 715 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 CTNNA1P35221 906 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 NUMBP49757 651 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 PAPOLAP51003 745 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 ARSEP51690 589 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 RWDD2BP57060 319 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 COPS2P61201 443 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 MMRN1Q13201 1228 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 ELAVL3Q14576 367 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 TTC31Q49AM3 519 aaPredicted RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 INO80DQ53TQ3 878 aaPredicted RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 TMCO4Q5TGY1 634 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 ZNF776Q68DI1 518 aaPredicted RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 KIAA1324Q6UXG2 1013 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 CPNE8Q86YQ8 564 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 MAML2Q8IZL2 1156 aaPredicted RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 ATPAF2Q8N5M1 289 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 PCDH20Q8N6Y1 951 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 PRSS33Q8NF86 280 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 EXD1Q8NHP7 514 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 RAPGEF5Q92565 580 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 ISG20Q96AZ6 181 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 SIPA1Q96FS4 1042 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 CELF6Q96J87 481 aaKnown RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 RNF157Q96PX1 679 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 GOLPH3Q9H4A6 298 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
SSR4-202ENST00000370085 TRIM10Q9UDY6 481 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 SLCO3A1Q9UIG8 710 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 SCML1Q9UN30 329 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 PCDHA3Q9Y5H8 950 aa14.05□□□□□ -0.16
SSR4-202ENST00000370085 MUC22E2RYF6 1773 aaPredicted RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 ANTXRLA6NF34 631 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 APOL1O14791 398 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 ALOX15BO15296 676 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 ZMPSTE24O75844 475 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 DNTTP04053 509 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 CD48P09326 243 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 TDGF1P13385 188 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 COL9A1P20849 921 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 IL4RP24394 825 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 CTNNA2P26232 953 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 FNTBP49356 437 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 SNRPD1P62314 119 aaKnown RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 CCDC15Q0P6D6 951 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 TCF15Q12870 199 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 RFTN1Q14699 578 aaPredicted RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 KIAA1211LQ6NV74 962 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 LINGO4Q6UY18 593 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 TMPRSS6Q8IU80 811 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 ZNF366Q8N895 744 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 LRRC57Q8N9N7 239 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 PCDH19Q8TAB3 1148 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 RNF25Q96BH1 459 aaPredicted RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 MYO19Q96H55 970 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 ZNF599Q96NL3 588 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 SLC39A8Q9C0K1 460 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 NOL6Q9H6R4 1146 aaKnown RBP14.04□□□□□ -0.16
SSR4-202ENST00000370085 PRSS16Q9NQE7 514 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 C2orf42Q9NWW7 574 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 RAB23Q9ULC3 237 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 WDFY4Q6ZS81 3184 aa14.04□□□□□ -0.16
SSR4-202ENST00000370085 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 BNIP3LO60238 219 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 PRAMEF11O60813 436 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 SIN3BO75182 1162 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 NEBLO76041 1014 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 ADH1BP00325 375 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 GABRG2P18507 467 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 NDUFV2P19404 249 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 GLDCP23378 1020 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 OXTRP30559 389 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 PXNP49023 591 aaPredicted RBP14.03□□□□□ -0.16
SSR4-202ENST00000370085 DNA2P51530 1060 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 ARF5P84085 180 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 RAD51Q06609 339 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 IL10RBQ08334 325 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 PAFAH1B3Q15102 231 aaKnown RBP14.03□□□□□ -0.16
SSR4-202ENST00000370085 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 AFMIDQ63HM1 303 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 TIGD7Q6NT04 549 aaPredicted RBP14.03□□□□□ -0.16
SSR4-202ENST00000370085 CEP68Q76N32 757 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 NPWQ8N729 165 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 ZBTB44Q8NCP5 570 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 FRS2Q8WU20 508 aa14.03□□□□□ -0.16
SSR4-202ENST00000370085 NELL1Q92832 810 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms