RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 NANOGNBQ7Z5D8 188 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 LSMEM2Q8N112 164 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 FAM110BQ8TC76 370 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 CYGBQ8WWM9 190 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 SREK1Q8WXA9 508 aaKnown RBP7.9□□□□□ -1.14
SYCP1-202ENST00000369522 LPAR1Q92633 364 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 C12orf43Q96C57 262 aaKnown RBP7.9□□□□□ -1.14
SYCP1-202ENST00000369522 AGAP2Q99490 1192 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 CPNE1Q99829 537 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 MCMBPQ9BTE3 642 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 DRC3Q9H069 523 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 VPS33BQ9H267 617 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 IPO11Q9UI26 975 aaKnown RBP7.9□□□□□ -1.14
SYCP1-202ENST00000369522 FZD1Q9UP38 647 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 RAP2CQ9Y3L5 183 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 COPG1Q9Y678 874 aaKnown RBP7.9□□□□□ -1.14
SYCP1-202ENST00000369522 USP3Q9Y6I4 520 aa7.9□□□□□ -1.14
SYCP1-202ENST00000369522 A0A0A0MRY4 1105 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 IGKV6D-21A0A0A0MT36 114 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 C1orf232A0A0U1RR37 186 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 RNF103-CHMP3A0A140T963 221 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 TRIM38O00635 465 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 HTRA2O43464 458 aaPredicted RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 NFICP08651 508 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 RPL14P50914 215 aaKnown RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 LIMK2P53671 638 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 BNIP3Q12983 259 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 ITGADQ13349 1161 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 TGFBIQ15582 683 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 DPYSL2Q16555 572 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 ZNF667Q5HYK9 610 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 SEL1L3Q68CR1 1132 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 LRRC8EQ6NSJ5 796 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 TMEM53Q6P2H8 277 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 COLGALT1Q8NBJ5 622 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 HMGCLL1Q8TB92 370 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 HM13Q8TCT9 377 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 TRPC4APQ8TEL6 797 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 ATG4CQ96DT6 458 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 ANKRD36BP1Q96IX9 119 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 SPATA13Q96N96 652 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 AGAP3Q96P47 875 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 UHRF1Q96T88 793 aaPredicted RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 ILKAPQ9H0C8 392 aaPredicted RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 NOL11Q9H8H0 719 aaKnown RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.15
SYCP1-202ENST00000369522 GTF2IRD1Q9UHL9 959 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 CDH7Q9ULB5 785 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 AP4S1Q9Y587 144 aa7.9□□□□□ -1.15
SYCP1-202ENST00000369522 A0A096LPK6 155 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 A0A1W2PPW3 197 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 DLGAP1O14490 977 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 LSM1O15116 133 aaKnown RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TRIM24O15164 1050 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 SPTLC1O15269 473 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TPD52L2O43399 206 aaKnown RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 SERPINB7O75635 380 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ATE1O95260 518 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 CLIC3O95833 236 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TNNC2P02585 160 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 INHBBP09529 407 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 GJA8P48165 433 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 RGS7P49802 495 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TRAF2Q12933 501 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ARL13AQ5H913 290 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 HEATR6Q6AI08 1181 aaKnown RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 STYK1Q6J9G0 422 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 DCLRE1AQ6PJP8 1040 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ZBTB49Q6ZSB9 765 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 SETD3Q86TU7 594 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 HTR3CQ8WXA8 447 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 STON2Q8WXE9 905 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 COX4I2Q96KJ9 171 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 KCTD15Q96SI1 283 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TBCBQ99426 244 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 LGMNQ99538 433 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 C11orf84Q9BUA3 381 aaPredicted RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 NMRAL1Q9HBL8 299 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 EIF2B3Q9NR50 452 aaKnown RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ADAM28Q9UKQ2 775 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 COL4A5P29400 1685 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 SYNJ2BP-COX16A0A087WUM0 186 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TRIM64A6NGJ6 449 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 GOLGA8TH3BQL2 631 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 K7EPI3 171 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TK2O00142 265 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 SOCS2O14508 198 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 KDM1AO60341 852 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 CBFA2T3O75081 653 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 H2AFYO75367 372 aaKnown RBP7.89□□□□□ -1.15
SYCP1-202ENST00000369522 PIGNO95427 931 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ALDH2P05091 517 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 CXCL8P10145 99 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 VDRP11473 427 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 IDO1P14902 403 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 TFEBP19484 476 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 HMOX2P30519 316 aa7.89□□□□□ -1.15
SYCP1-202ENST00000369522 ADSLP30566 484 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms