RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LAMA1P25391 3075 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 C2orf78A6NCI8 922 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 APOL1O14791 398 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 MCF2LO15068 1137 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 TP73O15350 636 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 LATS1O95835 1130 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 OLFM2O95897 454 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 CKMP06732 381 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 RETP07949 1114 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 SSR1P43307 286 aaKnown RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 GALK1P51570 392 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 MLLT6P55198 1093 aaPredicted RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 ADCY2Q08462 1091 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 DPYSQ14117 519 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 SF3A2Q15428 464 aaKnown RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 KCNT1Q5JUK3 1230 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 DAB2IPQ5VWQ8 1189 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 RHBDF2Q6PJF5 856 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 PRR23CQ6ZRP0 262 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 HDXQ7Z353 690 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 PCGF5Q86SE9 256 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 KBTBD6Q86V97 674 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 HOOK3Q86VS8 718 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 CNPY4Q8N129 248 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 SCAMP5Q8TAC9 235 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 CASKIN2Q8WXE0 1202 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 P3H4Q92791 437 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 ART4Q93070 314 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 LRRC45Q96CN5 670 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 IER2Q9BTL4 223 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 TXLNGYQ9BZA5 131 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 ARRDC1-AS1Q9H2J1 176 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 TDP1Q9NUW8 608 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 OBP2AQ9NY56 170 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 GRHL1Q9NZI5 618 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 CWC15Q9P013 229 aaKnown RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 CALCOCO1Q9P1Z2 691 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 PPARGC1AQ9UBK2 798 aaKnown RBP9.03□□□□□ -0.96
SNX27-201ENST00000368838 PCSK1NQ9UHG2 260 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 INVSQ9Y283 1065 aa9.03□□□□□ -0.96
SNX27-201ENST00000368838 IGLV3-10A0A075B6K4 115 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 PRR5-ARHGAP8B1AHC4 643 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 PIK3R2O00459 728 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 DCLK1O15075 740 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 FGF10O15520 208 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 MTSS1O43312 755 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SEC31AO94979 1220 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 CD48P09326 243 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 KRT10P13645 584 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 TFE3P19532 575 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 GJA4P35212 333 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 HSPA9P38646 679 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 CARSP49589 748 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 ARHGAP8P85298 464 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 OTUD4Q01804 1114 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 GRSF1Q12849 480 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNX27-201ENST00000368838 IFRD2Q12894 506 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 KRT81Q14533 505 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SLMAPQ14BN4 828 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 CDO1Q16878 200 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SMTNL2Q2TAL5 461 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 P3H1Q32P28 736 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 TMEM196Q5HYL7 178 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 ARMC3Q5W041 872 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SCYL2Q6P3W7 929 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 C1orf228Q6PIY5 440 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 TAC4Q86UU9 113 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 FAM131BQ86XD5 332 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 KLHDC8BQ8IXV7 354 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 ARL14EPQ8N8R7 260 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 RNF139Q8WU17 664 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 EZH1Q92800 747 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 MSANTD3Q96H12 275 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SNF8Q96H20 258 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 TSGA13Q96PP4 275 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 HEMGNQ9BXL5 484 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 CALN1Q9BXU9 219 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 USP29Q9HBJ7 922 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 ARHGEF4Q9NR80 690 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 RXFP3Q9NSD7 469 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 DUS2Q9NX74 493 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 STOML2Q9UJZ1 356 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 DNPEPQ9ULA0 475 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 SHOC2Q9UQ13 582 aa9.02□□□□□ -0.97
SNX27-201ENST00000368838 R3HDM2Q9Y2K5 976 aaKnown RBP9.02□□□□□ -0.97
SNX27-201ENST00000368838 KMT2BQ9UMN6 2715 aaPredicted RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 PLXND1Q9Y4D7 1925 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ASCC3Q8N3C0 2202 aaKnown RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 TRAV19A0A0A6YYK7 116 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms