RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 HNRNPLLQ8WVV9 542 aaKnown RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 C2orf49Q9BVC5 232 aaPredicted RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 VPS51Q9UID3 782 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 SNX10Q9Y5X0 201 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 ATRXP46100 2492 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 IGLV3-10A0A075B6K4 115 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 A0A087WV48 116 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 K7ERQ8 282 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 SNAP91O60641 907 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 RNGTTO60942 597 aaKnown RBP16.41■□□□□ 0.22
CKS1B-202ENST00000368436 RHOCP08134 193 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 CYP11B1P15538 503 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 CHRNA3P32297 505 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 SULT1E1P49888 294 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
CKS1B-202ENST00000368436 DEUP1Q05D60 604 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 DRAP1Q14919 205 aaPredicted RBP16.41■□□□□ 0.22
CKS1B-202ENST00000368436 POM121L1PQ3SYA9 428 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
CKS1B-202ENST00000368436 NEK5Q6P3R8 708 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 DCAF4L2Q8NA75 395 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 TMIEQ8NEW7 156 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 TBCBQ99426 244 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 TUBGCP2Q9BSJ2 902 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
CKS1B-202ENST00000368436 PAXBP1Q9Y5B6 917 aa16.41■□□□□ 0.22
CKS1B-202ENST00000368436 A0A0D9SEW6 157 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 SMAD6O43541 496 aaKnown RBP16.4■□□□□ 0.22
CKS1B-202ENST00000368436 BNIP3LO60238 219 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 PRKCSHP14314 528 aaPredicted RBP16.4■□□□□ 0.22
CKS1B-202ENST00000368436 JUPP14923 745 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 CLCN6P51797 869 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 ILKQ13418 452 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 FBXL19Q6PCT2 694 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 LRRC31Q6UY01 552 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 ERICH1Q86X53 443 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 TMEM145Q8NBT3 493 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 ARRDC3Q96B67 414 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 KLHDC7BQ96G42 594 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 CCDC114Q96M63 670 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 NAA15Q9BXJ9 866 aaKnown RBP16.4■□□□□ 0.22
CKS1B-202ENST00000368436 PDCL3Q9H2J4 239 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 TMPRSS4Q9NRS4 437 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 ZNF212Q9UDV6 495 aa16.4■□□□□ 0.22
CKS1B-202ENST00000368436 CHD5Q8TDI0 1954 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 A0A1W2PQU0 124 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 RNF103O00237 685 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 KPNA3O00505 521 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-202ENST00000368436 PRNPP04156 253 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CKMT2P17540 419 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 ERCC5P28715 1186 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-202ENST00000368436 HNF1BP35680 557 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 FLT3P36888 993 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CCDC15Q0P6D6 951 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 ZNF284Q2VY69 593 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 C6orf118Q5T5N4 469 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 FAM102AQ5T9C2 384 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-202ENST00000368436 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 TRNP1Q6NT89 227 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 ARCQ7LC44 396 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CACTIN-AS1Q8N1I8 211 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CHST14Q8NCH0 376 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 HAPLN3Q96S86 360 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 HDAC8Q9BY41 377 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 MPP6Q9NZW5 540 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 TMEM59LQ9UK28 342 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CA5BQ9Y2D0 317 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 FHOD1Q9Y613 1164 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 BAHCC1Q9P281 2608 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 CELSR3Q9NYQ7 3312 aa16.39■□□□□ 0.21
CKS1B-202ENST00000368436 TDRD6O60522 2096 aaKnown RBP16.38■□□□□ 0.21
CKS1B-202ENST00000368436 ILVBLA1L0T0 632 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 SLC31A1O15431 190 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 ZNF821O75541 412 aaPredicted RBP16.38■□□□□ 0.21
CKS1B-202ENST00000368436 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
CKS1B-202ENST00000368436 RRM1P23921 792 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 ACP1P24666 158 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 OR1E1P30953 314 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 CLDN6P56747 220 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 PROX2Q3B8N5 592 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 SOWAHCQ53LP3 525 aaPredicted RBP16.38■□□□□ 0.21
CKS1B-202ENST00000368436 HES3Q5TGS1 186 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 C22orf39Q6P5X5 142 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 LINGO4Q6UY18 593 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 ZNF783Q6ZMS7 281 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 TFAP2DQ7Z6R9 452 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
CKS1B-202ENST00000368436 HORMAD1Q86X24 394 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 SLC25A45Q8N413 288 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 OR7D4Q8NG98 312 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms