RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC22A2O15244 555 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 MAP3K13O43283 966 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 GCATO75600 419 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ALDH1A2O94788 518 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 STAU1O95793 577 aaKnown RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 SERPINE1P05121 402 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ASGR2P07307 311 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 SETSIPP0DME0 302 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 VDRP11473 427 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 DESP17661 470 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 PROZP22891 400 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 GSTT1P30711 240 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 CLCN4P51793 760 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 DEUP1Q05D60 604 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 LSAMPQ13449 338 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 MED21Q13503 144 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ZBTB41Q5SVQ8 909 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 CYP4A22Q5TCH4 519 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 METTL21CQ5VZV1 264 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 TMEM105Q8N8V8 129 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 TDRD5Q8NAT2 981 aaKnown RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 EBNA1BP2Q99848 306 aaKnown RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 TMEM175Q9BSA9 504 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 NAT9Q9BTE0 207 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 THTPAQ9BU02 230 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 ETNK2Q9NVF9 386 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 STK39Q9UEW8 545 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 LIMD1Q9UGP4 676 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 BCAP29Q9UHQ4 241 aa11.77□□□□□ -0.53
USF1-201ENST00000368019 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.53
USF1-201ENST00000368019 PRR5-ARHGAP8B1AHC4 643 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 H0Y858 1186 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 H7C0C1 242 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 MDM4O15151 490 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 INPPL1O15357 1258 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ZBED1O96006 694 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ALDH2P05091 517 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CNPP09543 421 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 ADSLP30566 484 aaPredicted RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 CA8P35219 290 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ATP5OP48047 213 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 NR2C2P49116 596 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 COPAP53621 1224 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 AQP5P55064 265 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CDH6P55285 790 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 POLE2P56282 527 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ARHGAP8P85298 464 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 SEMA5AQ13591 1074 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CAPSQ13938 189 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 FAXCQ5TGI0 409 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 MBLAC2Q68D91 279 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CAND1Q86VP6 1230 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 HACE1Q8IYU2 909 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 PHC3Q8NDX5 983 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ATP2A3Q93084 1043 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ACSF2Q96CM8 615 aaPredicted RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 CMTM5Q96DZ9 223 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 CFAP36Q96G28 342 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 SIGLEC10Q96LC7 697 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 C12orf65Q9H3J6 166 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 SFXN1Q9H9B4 322 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 EIF2B3Q9NR50 452 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 RAB6BQ9NRW1 208 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 C6orf203Q9P0P8 240 aaPredicted RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 PADI4Q9UM07 663 aa11.76□□□□□ -0.53
USF1-201ENST00000368019 PRPF19Q9UMS4 504 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.76□□□□□ -0.53
USF1-201ENST00000368019 ZNF292O60281 2723 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 C2CD4BA6NLJ0 364 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 NRP1O14786 923 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 DENRO43583 198 aaKnown RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 PRPSAP2O60256 369 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 GFRA3O60609 400 aa11.75□□□□□ -0.53
USF1-201ENST00000368019 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
USF1-201ENST00000368019 PAPLNO95428 1278 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms