RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PTPN20Q4JDL3 420 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 C3P1Q6ZMU1 363 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DHFR2Q86XF0 187 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF395Q9H8N7 513 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FOLH1BQ9HBA9 442 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 WDR6Q9NNW5 1121 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NYAP2Q9P242 653 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AP2A2O94973 939 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SERPINA3P01011 423 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KITP10721 976 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DNAJC24Q6P3W2 148 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KLHL6Q8WZ60 621 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NCSTNQ92542 709 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SLC13A1Q9BZW2 595 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 HIPK3Q9H422 1215 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FAM207AQ9NSI2 230 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DCCP43146 1447 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GOLGA8SH3BPF8 625 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RTN2O75298 545 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SYN1P17600 705 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NR2F2P24468 414 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ACADLP28330 430 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MAP2K4P45985 399 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RGS4P49798 205 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 POU4F2Q12837 409 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TOR1AIP1Q5JTV8 583 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FBXO22Q8NEZ5 403 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KCNN1Q92952 543 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SERPINB11Q96P15 392 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GOLPH3Q9H4A6 298 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CALML5Q9NZT1 146 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RIMKLBQ9ULI2 386 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SH3PXD2BA1X283 911 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NAP1L6A6NFF2 107 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PPM1FP49593 454 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PRMT2P55345 433 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF200P98182 395 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC14Q15048 493 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SEC23AQ15436 765 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CYP1B1Q16678 543 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 UNC5DQ6UXZ4 953 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 IPMKQ8NFU5 416 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CD93Q9NPY3 652 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TAS2R8Q9NYW2 309 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TNRQ92752 1358 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ATP9AO75110 1047 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SC5DO75845 299 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DGAT1O75907 488 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PON1P27169 355 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 BCAMP50895 628 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PSME3P61289 254 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PPARAQ07869 468 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GPR68Q15743 365 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KIAA2013Q8IYS2 634 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 C19orf18Q8NEA5 215 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC74AQ96AQ1 378 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC74BQ96LY2 380 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NCANO14594 1321 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZW10O43264 779 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PAX7P23759 505 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FAM187BQ17R55 369 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 S100A7AQ86SG5 101 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CAMKVQ8NCB2 501 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NDC1Q9BTX1 674 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 BBS2Q9BXC9 721 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MPOP05164 745 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PPP3CBP16298 524 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 UBE3AQ05086 875 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GCKRQ14397 625 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GRM3Q14832 879 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MRNIPQ6NTE8 343 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZBTB49Q6ZSB9 765 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RALGPS2Q86X27 583 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 OR4A15Q8NGL6 344 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZBED3Q96IU2 234 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TM7SF2O76062 418 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DCDC1P59894 354 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DHX40Q8IX18 779 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 APOL6Q9BWW8 343 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MYNNQ9NPC7 610 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM49D1C9J1S8 452 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ADSSP30520 456 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DHPSP49366 369 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CHRNB3Q05901 458 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PDE4DQ08499 809 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CUL2Q13617 745 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NAPEPLDQ6IQ20 393 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SLITRK4Q8IW52 837 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 IQCKQ8N0W5 287 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ERP27Q96DN0 273 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NRBP2Q9NSY0 501 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ABCC3O15438 1527 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MADDQ8WXG6 1647 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 F8W810 466 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LRRTM2O43300 516 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SERPINA1P01009 418 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 EEF1B2P24534 225 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms