RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 MAN2A1Q16706 1144 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ACCSLQ4AC99 568 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 HES3Q5TGS1 186 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 SYPL2Q5VXT5 272 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 APCDD1Q8J025 514 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ARID1BQ8NFD5 2236 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-209ENST00000366735 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 RPRD1AQ96P16 312 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-209ENST00000366735 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ZSWIM1Q9BR11 485 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 NRSN2Q9GZP1 204 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 VPS16Q9H269 839 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 PREBQ9HCU5 417 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 EVA1BQ9NVM1 165 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ASNSD1Q9NWL6 643 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 CELSR3Q9NYQ7 3312 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 SLCO3A1Q9UIG8 710 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 CNTN6Q9UQ52 1028 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 LOC400499M0QZD8 3231 aa12.75□□□□□ -0.37
MRPL55-209ENST00000366735 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 RNGTTO60942 597 aaKnown RBP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 KRT83P78385 493 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 PDCLQ13371 301 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 EFHC1Q5JVL4 640 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 TMEM110Q86TL2 294 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 TRIM59Q8IWR1 403 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 MYEOVQ96EZ4 313 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 KREMEN1Q96MU8 473 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 EBF2Q9HAK2 575 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 DYRK4Q9NR20 520 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 TMEM51Q9NW97 253 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 CYTH4Q9UIA0 394 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 XPO7Q9UIA9 1087 aaKnown RBP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 VPS28Q9UK41 221 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 PAXBP1Q9Y5B6 917 aa12.74□□□□□ -0.37
MRPL55-209ENST00000366735 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 FASNP49327 2511 aaKnown RBP12.74□□□□□ -0.37
MRPL55-209ENST00000366735 SYNJ2BP-COX16A0A087WUM0 186 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ATP9BO43861 1147 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 CLDN11O75508 207 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 CALCAP01258 141 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 CKMT2P17540 419 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 DRD3P35462 400 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 PPP2CBP62714 309 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 PPP2CAP67775 309 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 UBXN1Q04323 297 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ZNF177Q13360 481 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 TRIM14Q14142 442 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 SHBQ15464 509 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 PRAMEF14Q5SWL7 426 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ACBD5Q5T8D3 534 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 DENND1BQ6P3S1 775 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 MARCH9Q86YJ5 346 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 LRRC8AQ8IWT6 810 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 PIP4K2CQ8TBX8 421 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ZNF606Q8WXB4 792 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 TSC1Q92574 1164 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 FAM131CQ96AQ9 280 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 IQCDQ96DY2 449 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 PRMT1Q99873 361 aaKnown RBP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 SYNCQ9H7C4 482 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 RRN3Q9NYV6 651 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 COX16Q9P0S2 106 aa12.73□□□□□ -0.37
MRPL55-209ENST00000366735 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.73□□□□□ -0.37
MRPL55-209ENST00000366735 ESPNB1AK53 854 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 MCF2LO15068 1137 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 RTN2O75298 545 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 ALPPL2P10696 532 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 ACP1P24666 158 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 MAT2AP31153 395 aaKnown RBP12.72□□□□□ -0.37
MRPL55-209ENST00000366735 ACTN2P35609 894 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 USP8P40818 1118 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 DAB2P98082 770 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 E2F1Q01094 437 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 SEMG2Q02383 582 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
MRPL55-209ENST00000366735 RTP5Q14D33 572 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 AGBL4Q5VU57 503 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 CXorf57Q6NSI4 855 aaKnown RBP12.72□□□□□ -0.37
MRPL55-209ENST00000366735 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms