RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PABPC5Q96DU9 382 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 UTP11Q9Y3A2 253 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 TRIOO75962 3097 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 MIA3Q5JRA6 1907 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 A0A1B0GVM2 712 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 TCAF2A6NFQ2 919 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 RASA4BC9J798 803 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 RASA4O43374 803 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 GAS8O95995 478 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CDH4P55283 916 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 GPS1Q13098 491 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 MTA1Q13330 715 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 FAXCQ5TGI0 409 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 HEATR6Q6AI08 1181 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CARNMT1Q8N4J0 409 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 SMRP1Q8NCR6 262 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 HTR3CQ8WXA8 447 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PWWP2AQ96N64 755 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PLA2G2FQ9BZM2 168 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 OTOL1A6NHN0 477 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 SOBPA7XYQ1 873 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 RNF103O00237 685 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 MZF1P28698 734 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 ADCY8P40145 1251 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 GAD2Q05329 585 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 POLD3Q15054 466 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 P3H1Q32P28 736 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 LACTB2Q53H82 288 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 TMC3Q7Z5M5 1100 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 ADGRG2Q8IZP9 1017 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CPXM2Q8N436 756 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CCDC89Q8N998 374 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 SMARCD2Q92925 531 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 ARHGEF2Q92974 986 aaKnown RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 RTP4Q96DX8 246 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 GAS2L1Q99501 681 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 CDX2Q99626 313 aaPredicted RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 RPP25Q9BUL9 199 aaKnown RBP12.48□□□□□ -0.41
CAPN9-203ENST00000366666 RAB17Q9H0T7 212 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 PCDH9Q9HC56 1237 aa12.48□□□□□ -0.41
CAPN9-203ENST00000366666 TCRBV7S3A2A0A539 114 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 HACD1B0YJ81 288 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 TRIM24O15164 1050 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 RAMP2O60895 175 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 CLDN11O75508 207 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 METTL18O95568 372 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 PEX11BO96011 259 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 PTPN3P26045 913 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 CHKAP35790 457 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 NDST2P52849 883 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 LMNB2Q03252 620 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 LY6G5CQ5SRR4 150 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ACBD5Q5T8D3 534 aaPredicted RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 FYB2Q5VWT5 728 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 BZW1Q7L1Q6 419 aaKnown RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ZNF567Q8N184 647 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 LZTR1Q8N653 840 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 OR2W6PQ8NHA6 318 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 FBXO25Q8TCJ0 367 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 FGF14Q92915 247 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 SEC16BQ96JE7 1060 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 DDX50Q9BQ39 737 aaKnown RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 TBC1D30Q9Y2I9 924 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 COL4A3Q01955 1670 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 H0Y626 953 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 LUC7L3O95232 432 aaKnown RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 GNA12Q03113 381 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 TNK2Q07912 1038 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 SERINC3Q13530 473 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ANKRD22Q5VYY1 191 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
CAPN9-203ENST00000366666 RHBDF2Q6PJF5 856 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 PARM1Q6UWI2 310 aa12.47□□□□□ -0.41
CAPN9-203ENST00000366666 VITQ6UXI7 678 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms