RNA–Protein interactions for RNA: ENST00000364522.1

RNU6-1078P-201, Transcript of RNA, U6 small nuclear 1078, pseudogene, humanhuman

BASIC

Gene RNU6-1078P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1078P-201ENST00000364522 EIF3BP55884 814 aaKnown RBP3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RPL7AP62424 266 aaKnown RBP3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RPE65Q16518 533 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CCNG2Q16589 344 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PLK5Q496M5 336 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 ARL13AQ5H913 290 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CCDC129Q6ZRS4 1044 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RRM2BQ7LG56 351 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CCDC105Q8IYK2 499 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PDILTQ8N807 584 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 ZNF398Q8TD17 642 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 HSPH1Q92598 858 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 USP6NLQ92738 828 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 KLHL29Q96CT2 875 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RITA1Q96K30 269 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FCRL5Q96RD9 977 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PRRX2Q99811 253 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 NUDT16L1Q9BRJ7 211 aaKnown RBP3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FRMD8Q9BZ67 464 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CCDC68Q9H2F9 335 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 MLXIPLQ9NP71 852 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PCDHB16Q9NRJ7 776 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SH3BP4Q9P0V3 963 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PEMTQ9UBM1 199 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 HSPB7Q9UBY9 170 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SERGEFQ9UGK8 458 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 VPS28Q9UK41 221 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TTLL3Q9Y4R7 772 aa3.79□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RSF1Q96T23 1441 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TEX13CA0A0J9YWL9 993 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 GTPBP1O00178 669 aaKnown RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 STRNO43815 780 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TMCC2O75069 709 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 ADAP00813 363 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SLPIP03973 132 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FCGR2AP12318 317 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CPOXP36551 454 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PTPN9P43378 593 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 BLKP51451 505 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 NUCB1Q02818 461 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 NEXNQ0ZGT2 675 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CUL4AQ13619 759 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 C10orf76Q5T2E6 689 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 KLHL24Q6TFL4 600 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 KRBA2Q6ZNG9 492 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RBM44Q6ZP01 1051 aaKnown RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 KLBQ86Z14 1044 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 UEVLDQ8IX04 471 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 RPAP2Q8IXW5 612 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 C16orf71Q8IYS4 520 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CNTROBQ8N137 903 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CPXM2Q8N436 756 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FAM47BQ8NA70 645 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 C11orf65Q8NCR3 313 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 NEU4Q8WWR8 484 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SARAFQ96BY9 339 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PERPQ96FX8 193 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 KLHL15Q96M94 604 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FRG2BQ96QU4 278 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PIP5K1AQ99755 562 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SLC32A1Q9H598 525 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SYNCQ9H7C4 482 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PRKRIP1Q9H875 184 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 CPNE5Q9HCH3 593 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 EIF2B3Q9NR50 452 aaKnown RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 IL17RBQ9NRM6 502 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 SEPT11Q9NVA2 429 aaKnown RBP3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 HAUS2Q9NVX0 235 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 IL1RAPL1Q9NZN1 696 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FBXO40Q9UH90 709 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PACSIN3Q9UKS6 424 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 FBXO4Q9UKT5 387 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 ICKQ9UPZ9 632 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 TNFSF13BQ9Y275 285 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 LYVE1Q9Y5Y7 322 aa3.78□□□□□ -1.8
RNU6-1078P-201ENST00000364522 PABPN1LA6NDY0 278 aaKnown RBP3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 AGAP14A8MT82 685 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 TAF4O00268 1085 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 AP3D1O14617 1153 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 FOXN1O15353 648 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 AHCYL1O43865 530 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 SERPINC1P01008 464 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 SPARCP09486 303 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 GPD1P21695 349 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 TACR3P29371 465 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 HOXA7P31268 230 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 CTCFP49711 727 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 CYP4A11Q02928 519 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 ABHD18Q0P651 414 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 MTA1Q13330 715 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 ACVR2BQ13705 512 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 C5orf22Q49AR2 442 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 CERKLQ49MI3 558 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 KIAA1755Q5JYT7 1200 aa3.77□□□□□ -1.81
RNU6-1078P-201ENST00000364522 FAM171A1Q5VUB5 890 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms