RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ZBTB8OSQ8IWT0 167 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CHERPQ8IWX8 916 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 STARD8Q92502 1023 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CDH19Q9H159 772 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIF1Q9H611 641 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 HMX2A2RU54 273 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 C9JVG2 144 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 APOL1O14791 398 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 B4GAT1O43505 415 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 GPC4O75487 556 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIGNO95427 931 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ERBB2P04626 1255 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 GRK2P25098 689 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ALDH4A1P30038 563 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 GNL1P36915 607 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 DPP6P42658 865 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TFDP2Q14188 446 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 INAQ16352 499 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 BORAQ6PGQ7 559 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 RNF135Q8IUD6 432 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 HTRA1Q92743 480 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TSNARE1Q96NA8 513 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ING2Q9H160 280 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 RPF2Q9H7B2 306 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIM2Q9P1W9 311 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CROTQ9UKG9 612 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 HES2Q9Y543 173 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 BRCA2P51587 3418 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TMEM233B4DJY2 109 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 SOCS2O14508 198 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 MYO1DO94832 1006 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ALDOAP04075 364 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PRKCBP05771 671 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIM1P11309 404 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ACAT1P24752 427 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 ADORA2BP29275 332 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 NIPAL1Q6NVV3 410 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 BTLAQ7Z6A9 289 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 CAND1Q86VP6 1230 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 KCTD17Q8N5Z5 321 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 RPL10LQ96L21 214 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 LTFP02788 710 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 ZNF26P17031 533 aaPredicted RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 CCNA2P20248 432 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 S100A1P23297 94 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 SDC4P31431 198 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 CASP2P42575 452 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 SERPINB9P50453 376 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 CLCN3P51790 818 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 PSME3P61289 254 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 NAPRTQ6XQN6 538 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 PLD6Q8N2A8 252 aaKnown RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 DNAJC28Q9NX36 388 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 EMCNQ9ULC0 261 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 SQORQ9Y6N5 450 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 KPNA4O00629 521 aaPredicted RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 MGAT1P26572 445 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 IRF9Q00978 393 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 CCDC153Q494R4 210 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 AGKQ53H12 422 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 TBCELQ5QJ74 424 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 LPIN3Q9BQK8 851 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 TRIM8Q9BZR9 551 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
VAMP1-201ENST00000361716 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 NOX1Q9Y5S8 564 aa12.9□□□□□ -0.34
VAMP1-201ENST00000361716 E7ENX8 843 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 KCNK1O00180 336 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 METTL18O95568 372 aa12.9□□□□□ -0.35
VAMP1-201ENST00000361716 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.35
VAMP1-201ENST00000361716 GBE1Q04446 702 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms