RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 PCDH18Q9HCL0 1135 aa11.58□□□□□ -0.55
COL4A5-202ENST00000361603 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.55
COL4A5-202ENST00000361603 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.55
COL4A5-202ENST00000361603 EPHB6O15197 1021 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CCL23P55773 120 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 DGKZQ13574 1117 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SGO1Q5FBB7 561 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 BRI3BPQ8WY22 251 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 KCNK1O00180 336 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 TREHO43280 583 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 TBL1XO60907 577 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 PFKMP08237 780 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ADRA1BP35368 520 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ATP6V1E1P36543 226 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CHRNB3Q05901 458 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 PSRC1Q6PGN9 363 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 TMCO5AQ8N6Q1 288 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 C12orf50Q8NA57 414 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 EBNA1BP2Q99848 306 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ZNF711Q9Y462 761 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 BCLAF3A2AJT9 711 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CXCL14O95715 111 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ERCC2P18074 760 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 VHLP40337 213 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SMAD3P84022 425 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SLC20A2Q08357 652 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SERAC1Q96JX3 654 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ACSS3Q9H6R3 686 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ITM2BQ9Y287 266 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CRYL1Q9Y2S2 319 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 NFKB1P19838 968 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 PSMA3P25788 255 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 PSMB4P28070 264 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CDK18Q07002 472 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 NFYCQ13952 458 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 CENPLQ8N0S6 344 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 PRELID2Q8N945 189 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SQORQ9Y6N5 450 aa11.58□□□□□ -0.56
COL4A5-202ENST00000361603 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
COL4A5-202ENST00000361603 ALOX15BO15296 676 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 NFATC1O95644 943 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 MLYCDO95822 493 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ANXA5P08758 320 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CORO1CQ9ULV4 474 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 WNT7AO00755 349 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CCNCP24863 283 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 PPP2R1BP30154 601 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 NEK2P51955 445 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SEMA4DQ92854 862 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 NKD2Q969F2 451 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 MRPL48Q96GC5 212 aaKnown RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 TMEM237Q96Q45 408 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 THUMPD3Q9BV44 507 aaKnown RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 DTNAQ9Y4J8 743 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 INHAP05111 366 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 BGNP21810 368 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 RRM2P31350 389 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CHI3L1P36222 383 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SERPINB5P36952 375 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 TRMT11Q7Z4G4 463 aaKnown RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 OR8D1Q8WZ84 308 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 PPP1R36Q96LQ0 422 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SLC25A23Q9BV35 468 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SRRDQ9UH36 339 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CDV3Q9UKY7 258 aaKnown RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 AGO1Q9UL18 857 aaKnown RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SKAP2O75563 359 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 KELP23276 732 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 L1CAMP32004 1257 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SEC24CP53992 1094 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 CDCA2Q69YH5 1023 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SLC30A9Q6PML9 568 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 TCP10LQ8TDR4 215 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 DPY30Q9C005 99 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 PRDM12Q9H4Q4 367 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 SYNDIG1Q9H7V2 258 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 PARVBQ9HBI1 364 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ARHGEF9O43307 516 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 NDST2P52849 883 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 FSTL1Q12841 308 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
COL4A5-202ENST00000361603 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-202ENST00000361603 ADAMTSL2Q86TH1 951 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms