RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GET4Q7L5D6 327 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-202ENST00000361545 ALG9Q9H6U8 611 aa18.85■□□□□ 0.61
CLIP2-202ENST00000361545 PRDM16Q9HAZ2 1276 aa18.85■□□□□ 0.61
CLIP2-202ENST00000361545 SEMA4BQ9NPR2 832 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-202ENST00000361545 GPSM3Q9Y4H4 160 aa18.85■□□□□ 0.61
CLIP2-202ENST00000361545 MDM4O15151 490 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 RPL22P35268 128 aaKnown RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 JOSD2Q8TAC2 188 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 TRMT13Q9NUP7 481 aaKnown RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 B4GALT4O60513 344 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 CATP04040 527 aaKnown RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 ERBB2P04626 1255 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 CRHR2Q13324 411 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 DNAJC9Q8WXX5 260 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 NDRG1Q92597 394 aaKnown RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 FAM126AQ9BYI3 521 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 RHBGQ9H310 441 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 TMPRSS4Q9NRS4 437 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 CLCNKBP51801 687 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 GALNT3Q14435 633 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 ANKRD6Q9Y2G4 727 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 MAPK8P45983 427 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 CYP2A13Q16696 494 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 ADCK1Q86TW2 530 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 KLHL5Q96PQ7 755 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 NIFKQ9BYG3 293 aaKnown RBP18.84■□□□□ 0.61
CLIP2-202ENST00000361545 TAGLN3Q9UI15 199 aa18.84■□□□□ 0.61
CLIP2-202ENST00000361545 CHADO15335 359 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 H2AFXP16104 143 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 CCND1P24385 295 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 UNC5AQ6ZN44 842 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 RIPOR1Q6ZS17 1223 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 SH3GL1Q99961 368 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 ZNF670Q9BS34 389 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 AGO1Q9UL18 857 aaKnown RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 MAFBQ9Y5Q3 323 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-202ENST00000361545 TPP1O14773 563 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 PAGE1O75459 146 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 AMD1P17707 334 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 IYDQ6PHW0 289 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 SLC41A1Q8IVJ1 513 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 SCUBE1Q8IWY4 988 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 NDEL1Q9GZM8 345 aa18.83■□□□□ 0.61
CLIP2-202ENST00000361545 CA12O43570 354 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 TAS2R40P59535 323 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 PFKFB4Q16877 469 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 ZW10O43264 779 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 USP1O94782 785 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 PPP2R1BP30154 601 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 RCN1Q15293 331 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 IRAK1BP1Q5VVH5 260 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 BBS4Q96RK4 519 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 BRD9Q9H8M2 597 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 GMIPQ9P107 970 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 RBPJLQ9UBG7 517 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF844Q08AG5 666 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 CCL14Q16627 93 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 SMG7Q92540 1137 aaKnown RBP18.83■□□□□ 0.6
CLIP2-202ENST00000361545 THAP11Q96EK4 314 aa18.83■□□□□ 0.6
CLIP2-202ENST00000361545 GPR25O00155 361 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 IFNA14P01570 189 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 UBTFL6P0CB48 400 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 KCNA3P22001 575 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 ALFQ53S48 1182 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 IL27RAQ6UWB1 636 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 LRRC39Q96DD0 335 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 KREMEN1Q96MU8 473 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 NDNQ99608 321 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 GTF2A1LQ9UNN4 478 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 BANF1O75531 89 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 ICAM3P32942 547 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 SERPINB10P48595 397 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 GPR15P49685 360 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 CSTF3Q12996 717 aaKnown RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 ITIH4Q14624 930 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 HLA-DQA1Q5Y7H0 255 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 CYP4Z1Q86W10 505 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 CNBD2Q96M20 576 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 TSPAN18Q96SJ8 248 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 KCTD14Q9BQ13 255 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 USE1Q9NZ43 259 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 PCDHB9Q9Y5E1 797 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 FAM47E-STBD1D6RA91 191 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 CLK2P49760 499 aaKnown RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 MAD2L1Q13257 205 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 REPS1Q96D71 796 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 SLC40A1Q9NP59 571 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 KRT84Q9NSB2 600 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 THAP1Q9NVV9 213 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 ARL2P36404 184 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 MAGEC3Q8TD91 643 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-202ENST00000361545 SOHLH2Q9NX45 425 aa18.82■□□□□ 0.6
CLIP2-202ENST00000361545 RCCD1A6NED2 376 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 OPLAHO14841 1288 aa18.81■□□□□ 0.6
CLIP2-202ENST00000361545 CCDC166P0CW27 439 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms