RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 GDAP2Q9NXN4 497 aa16.5■□□□□ 0.23
IFT140-201ENST00000361339 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
IFT140-201ENST00000361339 TCN1P20061 433 aaPredicted RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 TPSB2P20231 275 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 SLC5A2P31639 672 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 TPSAB1Q15661 275 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 ACVR1CQ8NER5 493 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 GAB3Q8WWW8 586 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 GAD1Q99259 594 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 COPS7BQ9H9Q2 264 aaPredicted RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 HBS1LQ9Y450 684 aaKnown RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 ZNF865P0CJ78 1059 aaPredicted RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 NPR3P17342 541 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 RPL34P49207 117 aaKnown RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 CLCNKBP51801 687 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 DLG2Q15700 870 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 PID1Q7Z2X4 250 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 ZMIZ2Q8NF64 920 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 NPY6RQ99463 290 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 AGAP2Q99490 1192 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 OXCT2Q9BYC2 517 aaPredicted RBP16.49■□□□□ 0.23
IFT140-201ENST00000361339 LRRC4Q9HBW1 653 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
IFT140-201ENST00000361339 CASTOR2A6NHX0 329 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 TRDMT1O14717 391 aaKnown RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 AIM2O14862 343 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 KRT38O76015 456 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 PRKCGP05129 697 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 CCDC166P0CW27 439 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 TPH1P17752 444 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 DCTN2Q13561 401 aaKnown RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 PACS1Q6VY07 963 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 SMOQ99835 787 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 SIRPGQ9P1W8 387 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 APOBEC2Q9Y235 224 aaKnown RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 AP4B1Q9Y6B7 739 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 DCXO43602 365 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 CD4P01730 458 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 STRADAQ7RTN6 431 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 PTAR1Q7Z6K3 402 aaPredicted RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 ZNF554Q86TJ5 538 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 SIX6OS1Q8N1H7 587 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 CELF6Q96J87 481 aaKnown RBP16.48■□□□□ 0.23
IFT140-201ENST00000361339 HSFY1Q96LI6 401 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 ZNF560Q96MR9 790 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 CAB39LQ9H9S4 337 aa16.48■□□□□ 0.23
IFT140-201ENST00000361339 F8W810 466 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 STAMBPO95630 424 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 CRTAMO95727 393 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 BPGMP07738 259 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 SERPINA6P08185 405 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 ERCC2P18074 760 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 NR2C2P49116 596 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 NUMBP49757 651 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 GRM2Q14416 872 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 FRMD7Q6ZUT3 714 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 TNS4Q8IZW8 715 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 PHTF2Q8N3S3 785 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 PCED1BQ96HM7 432 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 HNRNPABQ99729 332 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 E9PBE3 544 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 ATP9BO43861 1147 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 KLHL41O60662 606 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 DNAJA2O60884 412 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 TRMUO75648 421 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 KCNE1P15382 129 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 SERPINB8P50452 374 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 NIPAL4Q0D2K0 466 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 PPP2R5DQ14738 602 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 C16orf72Q14CZ0 275 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 NRF1Q16656 503 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 EML3Q32P44 896 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 FASTKD1Q53R41 847 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 USP13Q92995 863 aaPredicted RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 SENP8Q96LD8 212 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 DCUN1D5Q9BTE7 237 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 CCDC28BQ9BUN5 200 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 PFDN4Q9NQP4 134 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 NCAM1P13591 858 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 IFRD2Q12894 506 aaPredicted RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 RALGAPA2Q2PPJ7 1873 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 SV2CQ496J9 727 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 LIMS2Q7Z4I7 341 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 PLD6Q8N2A8 252 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 LRGUKQ96M69 825 aa16.47■□□□□ 0.23
IFT140-201ENST00000361339 WDR6Q9NNW5 1121 aaKnown RBP16.47■□□□□ 0.23
IFT140-201ENST00000361339 SDR42E2A6NKP2 422 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 SIN3BO75182 1162 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 DAB1O75553 588 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms