RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TBC1D30Q9Y2I9 924 aa21.65■■□□□ 1.06
CD47-202ENST00000361309 FARP1Q9Y4F1 1045 aaPredicted RBP21.65■■□□□ 1.06
CD47-202ENST00000361309 PCDHB1Q9Y5F3 818 aa21.65■■□□□ 1.06
CD47-202ENST00000361309 ZNF462Q96JM2 2506 aa21.64■■□□□ 1.06
CD47-202ENST00000361309 BECN2A8MW95 431 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 KPNA3O00505 521 aaPredicted RBP21.64■■□□□ 1.05
CD47-202ENST00000361309 PAGE1O75459 146 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 CHRNA3P32297 505 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 ARHGAP44Q17R89 818 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 ZNF284Q2VY69 593 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 OR6B2Q6IFH4 312 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 FAM183BPQ6ZVS7 135 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 TMC6Q7Z403 805 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 PASD1Q8IV76 773 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 SPACA3Q8IXA5 215 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 ELOA2Q8IYF1 753 aaPredicted RBP21.64■■□□□ 1.05
CD47-202ENST00000361309 ATP11CQ8NB49 1132 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 LSM14AQ8ND56 463 aaKnown RBP21.64■■□□□ 1.05
CD47-202ENST00000361309 ARRDC3Q96B67 414 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 PSMB7Q99436 277 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 CALN1Q9BXU9 219 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 SIK2Q9H0K1 926 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 HS3ST2Q9Y278 367 aa21.64■■□□□ 1.05
CD47-202ENST00000361309 TEX51A0A1B0GUA7 166 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 BIN1O00499 593 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 SNAP91O60641 907 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 PIAS2O75928 621 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 CNTN5O94779 1100 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 CDH4P55283 916 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 KRT83P78385 493 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 MTA1Q13330 715 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 MORC3Q14149 939 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 C5orf22Q49AR2 442 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 NEK5Q6P3R8 708 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 C11orf57Q6ZUT1 292 aaPredicted RBP21.63■■□□□ 1.05
CD47-202ENST00000361309 HORMAD1Q86X24 394 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 OR13H1Q8NG92 308 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 OR2A12Q8NGT7 310 aa21.63■■□□□ 1.05
CD47-202ENST00000361309 TENM4Q6N022 2769 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 K7ERQ8 282 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 M0QYT0 321 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 RNF103O00237 685 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 GIMD1P0DJR0 217 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 CKMT1AP12532 417 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 HNRNPA2B1P22626 353 aaKnown RBP21.62■■□□□ 1.05
CD47-202ENST00000361309 RRM1P23921 792 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 AKT2P31751 481 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 CLDN2P57739 230 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 CXADRP78310 365 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 PAK1Q13153 545 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 TRIM65Q6PJ69 517 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 OLFML1Q6UWY5 402 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 TMIEQ8NEW7 156 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 CCDC114Q96M63 670 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 NOX5Q96PH1 765 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 LGMNQ99538 433 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 DYRK4Q9NR20 520 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 VPS51Q9UID3 782 aa21.62■■□□□ 1.05
CD47-202ENST00000361309 ZFR2Q9UPR6 939 aaKnown RBP21.62■■□□□ 1.05
CD47-202ENST00000361309 SMAD6O43541 496 aaKnown RBP21.61■■□□□ 1.05
CD47-202ENST00000361309 OPA1O60313 960 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 DAB1O75553 588 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 PCDH8O95206 1070 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 ERBB2P04626 1255 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 RHOCP08134 193 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 MYF5P13349 255 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 SLC9A1P19634 815 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 NOS2P35228 1153 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 APBA1Q02410 837 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 CCDC15Q0P6D6 951 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 ALFQ53S48 1182 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 CDCP2Q5VXM1 449 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 GCNT7Q6ZNI0 430 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 SLC22A18ASQ8N1D0 253 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 CHST14Q8NCH0 376 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 C1orf131Q8NDD1 294 aaKnown RBP21.61■■□□□ 1.05
CD47-202ENST00000361309 NAF1Q96HR8 494 aaKnown RBP21.61■■□□□ 1.05
CD47-202ENST00000361309 FAM81BQ96LP2 452 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 C2orf49Q9BVC5 232 aaPredicted RBP21.61■■□□□ 1.05
CD47-202ENST00000361309 PIGVQ9NUD9 493 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 SNX10Q9Y5X0 201 aa21.61■■□□□ 1.05
CD47-202ENST00000361309 RP1P56715 2156 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 ADCY5O95622 1261 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 PRNPP04156 253 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 MPOP05164 745 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 SLC6A3Q01959 620 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 KIF26BQ2KJY2 2108 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 ARSIQ5FYB1 569 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 OTUD1Q5VV17 481 aaPredicted RBP21.6■■□□□ 1.05
CD47-202ENST00000361309 SEL1L3Q68CR1 1132 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 PCSK4Q6UW60 755 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 LINGO4Q6UY18 593 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 ERN2Q76MJ5 926 aaKnown RBP21.6■■□□□ 1.05
CD47-202ENST00000361309 SLC26A9Q7LBE3 791 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 ZNF843Q8N446 348 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 ZNF248Q8NDW4 579 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 APOLD1Q96LR9 279 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 TKTL2Q9H0I9 626 aa21.6■■□□□ 1.05
CD47-202ENST00000361309 WDCPQ9H6R7 721 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms