RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 NEU3Q9UQ49 428 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 TNFRSF10BO14763 440 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 KCNA4P22459 653 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 SERPINB3P29508 390 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 SERPINB9P50453 376 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 USP46P62068 366 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 PDE1CQ14123 709 aaPredicted RBP16.3■□□□□ 0.2
PTPN5-201ENST00000358540 HSP90AA5PQ58FG0 334 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 N4BP2L1Q5TBK1 243 aaPredicted RBP16.3■□□□□ 0.2
PTPN5-201ENST00000358540 TRAF7Q6Q0C0 670 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 TTC7BQ86TV6 843 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 E2F7Q96AV8 911 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 VCX3BQ9H321 246 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 KCNK13Q9HB14 408 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 VCX3AQ9NNX9 186 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 BFARQ9NZS9 450 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 PDP2Q9P2J9 529 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 C2CD2LO14523 706 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 MYL2P10916 166 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 SLC24A5Q71RS6 500 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
PTPN5-201ENST00000358540 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 MCUR1Q96AQ8 359 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 CAB39LQ9H9S4 337 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 PREBQ9HCU5 417 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 PCDHB8Q9UN66 801 aa16.3■□□□□ 0.2
PTPN5-201ENST00000358540 TBX18O95935 607 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ZBTB16Q05516 673 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
PTPN5-201ENST00000358540 DLG2Q15700 870 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ATPAF2Q8N5M1 289 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 TEKT5Q96M29 485 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 UROC1Q96N76 676 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 FAM192AQ9GZU8 254 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ATXN3LQ9H3M9 355 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ABCC13Q9NSE7 274 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 TRAFD1O14545 582 aaPredicted RBP16.29■□□□□ 0.2
PTPN5-201ENST00000358540 NCAM2O15394 837 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 GYG2O15488 501 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 PSMG1O95456 288 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 IGLV3-25P01717 112 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 STRA8Q7Z7C7 330 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ALYREFQ86V81 257 aaKnown RBP16.29■□□□□ 0.2
PTPN5-201ENST00000358540 ARHGAP12Q8IWW6 846 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 IPMKQ8NFU5 416 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 WDR60Q8WVS4 1066 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
PTPN5-201ENST00000358540 SLC39A8Q9C0K1 460 aa16.29■□□□□ 0.2
PTPN5-201ENST00000358540 TADA2AO75478 443 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 LYPLA1O75608 230 aaPredicted RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CAPN15O75808 1086 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 DLDP09622 509 aaKnown RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 SAT1P21673 171 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CCR1P32246 355 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CRHR1P34998 444 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 KCTD11Q693B1 232 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CLNKQ7Z7G1 428 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 KBTBD2Q8IY47 623 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 COLGALT2Q8IYK4 626 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 PPP1R14CQ8TAE6 165 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 LRRC40Q9H9A6 602 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 STARD7Q9NQZ5 370 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ARMCX1Q9P291 453 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 EMCNQ9ULC0 261 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 SLC27A5Q9Y2P5 690 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CCDC22O60826 627 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 LYNP07948 512 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 HMBSP08397 361 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 TYMPP19971 482 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 NMBRP28336 390 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 TYK2P29597 1187 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ZNF184Q99676 751 aaPredicted RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 CASS4Q9NQ75 786 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 C20orf96Q9NUD7 363 aaPredicted RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ARHGEF38Q9NXL2 777 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 GMIPQ9P107 970 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 RPL26L1Q9UNX3 145 aaKnown RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 WASF2Q9Y6W5 498 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ZCWPW2A0A1B0GU75 182 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 GSC2O15499 205 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
PTPN5-201ENST00000358540 ITPRIPL1Q6GPH6 555 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 SPNS2Q8IVW8 549 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 BTBD10Q9BSF8 475 aa16.28■□□□□ 0.2
PTPN5-201ENST00000358540 TLE6Q9H808 572 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms