RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ZC3H7AQ8IWR0 971 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SYT11Q9BT88 431 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC32Q9BV29 185 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 DEFB129Q9H1M3 183 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NCF1P14598 390 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NOS2P35228 1153 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CDH13P55290 713 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FMO1Q01740 532 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ADAMTS16Q8TE57 1224 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RPS6KA6Q9UK32 745 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 AKAP12Q02952 1782 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 A0A088AWK7 358 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FADS2P1A8MWK0 482 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 STX11O75558 287 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TRUB2O95900 331 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 HLA-FP30511 346 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 AXLP30530 894 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 LRPAP1P30533 357 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF568Q3ZCX4 644 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 HABP4Q5JVS0 413 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CNSTQ6PJW8 725 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 METTL23Q86XA0 190 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SETD6Q8TBK2 473 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GNEQ9Y223 722 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF335Q9H4Z2 1342 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM43BA6NCK2 446 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 UGT2B4P06133 528 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PTPN2P17706 415 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NFIAQ12857 509 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TRAF2Q12933 501 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KLF1Q13351 362 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 MARK4Q96L34 752 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 C11orf70Q9BRQ4 267 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FBXO6Q9NRD1 293 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 EFCAB14O75071 495 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CDK4P11802 303 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ATP1A4Q13733 1029 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 OASLQ15646 514 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 MINDY1Q8N5J2 469 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NAT8LQ8N9F0 302 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PPHLN1Q8NEY8 458 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SPOCK2Q92563 424 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RPRD1BQ9NQG5 326 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SELENONQ9NZV5 590 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GRIP1Q9Y3R0 1128 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NUP205Q92621 2012 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ALDH1A2O94788 518 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 T-ENOLP0DO92 83 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GSTM2P28161 218 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ELK3P41970 407 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ATXN3P54252 364 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PRAMEP78395 509 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GPSM2P81274 684 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM117Q9H0C3 514 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 C12orf65Q9H3J6 166 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ACAD9Q9H845 621 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ERVW-1Q9UQF0 538 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FAM159BA6NKW6 160 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RARRES1P49788 294 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PPP5CP53041 499 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TPI1P60174 286 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SMU1Q2TAY7 513 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 REXO4Q9GZR2 422 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ARL8BQ9NVJ2 186 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 STUB1Q9UNE7 303 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 DCDC2CA8MYV0 355 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 EPHB6O15197 1021 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 MED30Q96HR3 178 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PPP3R2Q96LZ3 170 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SNX18Q96RF0 628 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC177Q9NQR7 707 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PCDHGB5Q9Y5G0 923 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PLIN4Q96Q06 1357 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CRTAMO95727 393 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 MBL2P11226 248 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ITIH1P19827 911 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TSNQ15631 228 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TBC1D25Q3MII6 688 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SNAP47Q5SQN1 464 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TTC7BQ86TV6 843 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 BRSK2Q8IWQ3 736 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 MPP5Q8N3R9 675 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 WNK4Q96J92 1243 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CEP295NLQ96MC4 621 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SH3BP5O60239 455 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HUS1O60921 280 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LIMK2P53671 638 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 BTG3Q14201 252 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 UBE2SQ16763 222 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NSMFQ6X4W1 530 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GJD3Q8N144 294 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM161BQ8NDZ6 487 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CHST13Q8NET6 341 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GRIP2Q9C0E4 1043 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SMPD3Q9NY59 655 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CHORDC1Q9UHD1 332 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM3O75382 744 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NADK2Q4G0N4 442 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ATP6AP1LQ52LC2 224 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms