RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TNFRSF10BO14763 440 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 MPOP05164 745 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 CCNCP24863 283 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 CSE1LP55060 971 aaKnown RBP16.11■□□□□ 0.17
PHTF1-201ENST00000357783 VWA5B1Q5TIE3 1220 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 BEND5Q7L4P6 421 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 FICDQ9BVA6 458 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 DCLRE1BQ9H816 532 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 GLOD4Q9HC38 313 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 MPP6Q9NZW5 540 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 APOBEC2Q9Y235 224 aaKnown RBP16.11■□□□□ 0.17
PHTF1-201ENST00000357783 KRT36O76013 467 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 TUBP50607 506 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 SESN3P58005 492 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 MXRA7P84157 204 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 GRM3Q14832 879 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 RAPH1Q70E73 1250 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 ZNF280BQ86YH2 543 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 TMPRSS6Q8IU80 811 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 SH3TC2Q8TF17 1288 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 FAM161BQ96MY7 647 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 KIFC1Q9BW19 673 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 MMADHCQ9H3L0 296 aaPredicted RBP16.11■□□□□ 0.17
PHTF1-201ENST00000357783 CPSF2Q9P2I0 782 aaKnown RBP16.11■□□□□ 0.17
PHTF1-201ENST00000357783 SUFUQ9UMX1 484 aa16.11■□□□□ 0.17
PHTF1-201ENST00000357783 AAR2Q9Y312 384 aaKnown RBP16.11■□□□□ 0.17
PHTF1-201ENST00000357783 MEI4A8MW99 385 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 FGF10O15520 208 aaPredicted RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PSMD3O43242 534 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 MAFKO60675 156 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 LMNAP02545 664 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ATP5BP06576 529 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CDK7P50613 346 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CCNG1P51959 295 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ZNF33AQ06730 810 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 SREBF2Q12772 1141 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 RCN1Q15293 331 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 MANEALQ5VSG8 457 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 NAPRTQ6XQN6 538 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 C14orf80Q86SX3 495 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ZNF598Q86UK7 904 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ARHGAP24Q8N264 748 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 FAM155AB1AL88 458 aaPredicted RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 G3V2L1 256 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CACNG3O60359 315 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PMPCBO75439 489 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ELNP15502 786 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 TYMPP19971 482 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PTDSS1P48651 473 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 IDH3AP50213 366 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 TAF11Q15544 211 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 RABGAP1LQ5R372 815 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PDPK2PQ6A1A2 396 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CLPTM1LQ96KA5 538 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 FCRL5Q96RD9 977 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 MCMBPQ9BTE3 642 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 NMRAL1Q9HBL8 299 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 OSER1Q9NX31 292 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 E9PAM4 449 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 AP3B1O00203 1094 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 MATN3O15232 486 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 PHGDHO43175 533 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 CA12O43570 354 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 HSPA4LO95757 839 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 HLA-DQB2P05538 268 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 SKIP12755 728 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 HOXC13P31276 330 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 AVPR1AP37288 418 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 GPR15P49685 360 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 USP4Q13107 963 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 TBCCQ15814 346 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ZC3HC1Q86WB0 502 aaKnown RBP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 IL12RB2Q99665 862 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ACSS2Q9NR19 701 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 RBM22Q9NW64 420 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHTF1-201ENST00000357783 HS3ST4Q9Y661 456 aa16.1■□□□□ 0.17
PHTF1-201ENST00000357783 ARHGEF37A1IGU5 675 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ANXA9O76027 345 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 DDHD2O94830 711 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
PHTF1-201ENST00000357783 NKX3-2P78367 333 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 CCDC6Q16204 474 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ANO4Q32M45 955 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 PCID2Q5JVF3 399 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ARTNQ5T4W7 220 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 PKN3Q6P5Z2 889 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 POU5F2Q8N7G0 328 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ZNF781Q8N8C0 355 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 AGR3Q8TD06 166 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
PHTF1-201ENST00000357783 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms