RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 MAPK14Q16539 360 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 AGKQ53H12 422 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 KCNT1Q5JUK3 1230 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ARMC3Q5W041 872 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SLC30A6Q6NXT4 461 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RASGEF1CQ8N431 466 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 FBXO22Q8NEZ5 403 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 C7orf25Q9BPX7 421 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 EPB41L4BQ9H329 900 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 COPS7AQ9UBW8 275 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MRTO4Q9UKD2 239 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 AAR2Q9Y312 384 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ADGRG1Q9Y653 693 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 A0A0X1KG70 313 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RAMP2O60895 175 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CREB1P16220 341 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TMED10P49755 219 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RENBPP51606 427 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PRKG2Q13237 762 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SWI5Q1ZZU3 235 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 OTUD3Q5T2D3 398 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ARMC12Q5T9G4 340 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SH3PXD2AQ5TCZ1 1133 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DEF8Q6ZN54 512 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RIPOR1Q6ZS17 1223 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MILR1Q7Z6M3 343 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ZCCHC7Q8N3Z6 543 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ZSCAN4Q8NAM6 433 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 OR6K2Q8NGY2 324 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 KIAA1143Q96AT1 154 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TEKT5Q96M29 485 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 CCDC134Q9H6E4 229 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ARL2BPQ9Y2Y0 163 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 NEU2Q9Y3R4 380 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PCDHGB5Q9Y5G0 923 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 COLEC10Q9Y6Z7 277 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 EFCAB5A4FU69 1503 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 STK36Q9NRP7 1315 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 LOC102724159A0A0B4J2E5 919 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 EFCAB10A6NFE3 127 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TBX1O43435 398 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RGS14O43566 566 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SCGB1D2O95969 90 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 FAM58BPP0C7Q3 252 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 HDCP19113 662 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 RFC5P40937 340 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 POLR2LP62875 67 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 DMPKQ09013 629 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PEX6Q13608 980 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PWP2Q15269 919 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TRIP10Q15642 601 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 SPIN3Q5JUX0 258 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 FAM131BQ86XD5 332 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 HID1Q8IV36 788 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 ADAM2Q99965 735 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 MCMBPQ9BTE3 642 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 TCOF1Q13428 1488 aaKnown RBP5.88□□□□□ -1.47
BRCA1-203ENST00000357654 PTPRJQ12913 1337 aa5.88□□□□□ -1.47
BRCA1-203ENST00000357654 A0A0J9YVX5 310 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TRPC5OSA6NMA1 111 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TMEM114B3SHH9 223 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 GPR89AB7ZAQ6 455 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RTN2O75298 545 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 IFNA6P05013 189 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 GPR89BP0CG08 455 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CD53P19397 219 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CCKBRP32239 447 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PIK3CGP48736 1102 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CCT3P49368 545 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TAS2R41P59536 307 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MAD2L1BPQ15013 274 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TLR1Q15399 786 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 KLHL35Q6PF15 583 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ABRAXAS1Q6UWZ7 409 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MSL3Q8N5Y2 521 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MCRS1Q96EZ8 462 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FAM20AQ96MK3 541 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TARS2Q9BW92 718 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BCAS3Q9H6U6 928 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MBD2Q9UBB5 411 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OGDHLQ9ULD0 1010 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 VANGL2Q9ULK5 521 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BTN3A1O00481 513 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SLC9A3R1O14745 358 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MPPED1O15442 326 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CST8O60676 142 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 KCNJ13O60928 360 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 DGAT1O75907 488 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 JCHAINP01591 159 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 EPHX1P07099 455 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 KLRC1P26715 233 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 LRPAP1P30533 357 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OTUD4Q01804 1114 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TRIM16LQ309B1 348 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SDHAF4Q5VUM1 108 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SLC8B1Q6J4K2 584 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TMC5Q6UXY8 1006 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 IL22RA1Q8N6P7 574 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms