RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PSMA8Q8TAA3 256 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 URGCPQ8TCY9 931 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 GPRASP2Q96D09 838 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF560Q96MR9 790 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 KLHL8Q9P2G9 620 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF45Q02386 682 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NME3Q13232 169 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TTC23LQ6PF05 361 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ELMSAN1Q6PJG2 1045 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 USP17L2Q6R6M4 530 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 MAP4K3Q8IVH8 894 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 COA7Q96BR5 231 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 C12orf43Q96C57 262 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 C6orf62Q9GZU0 229 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 TRIM45Q9H8W5 580 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 AS3MTQ9HBK9 375 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 FBXO40Q9UH90 709 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CHORDC1Q9UHD1 332 aaPredicted RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 ATPIF1Q9UII2 106 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 NOCTQ9UK39 431 aaKnown RBP6.67□□□□□ -1.34
TRIM38-201ENST00000357085 GRIP1Q9Y3R0 1128 aa6.67□□□□□ -1.34
TRIM38-201ENST00000357085 CNTNAP4Q9C0A0 1308 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 M0R2N6 131 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ASNSP08243 561 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 HOXC6P09630 235 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 STT3AP46977 705 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 NPY2RP49146 381 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ECT2LQ008S8 904 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 TMEM62Q0P6H9 643 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 TRIM32Q13049 653 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 MTMR1Q13613 665 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 HLFQ16534 295 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CYP4V2Q6ZWL3 525 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DENND1AQ8TEH3 1009 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 MFSD14AQ96MC6 490 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 Q96MT0 163 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 POLR3FQ9H1D9 316 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 PCDHA10Q9Y5I2 948 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SIGLEC16A6NMB1 481 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SERPINB7O75635 380 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 HMGCRP04035 888 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 NFKB1P19838 968 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ACO1P21399 889 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 FAM102AQ5T9C2 384 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 FAM45BPQ6NSW5 357 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 EID3Q8N140 333 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ATP6V0D2Q8N8Y2 350 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CPA5Q8WXQ8 436 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 EBNA1BP2Q99848 306 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 LRRC4Q9HBW1 653 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 PKD2L1Q9P0L9 805 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 GLS2Q9UI32 602 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 USP18Q9UMW8 372 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CITO14578 2027 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 TMCC2O75069 709 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CAPZA2P47755 286 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 RAD51Q06609 339 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CDH17Q12864 832 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DPYSL3Q14195 570 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DCAF15Q66K64 600 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 MON1BQ7L1V2 547 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CCDC60Q8IWA6 550 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CCDC36Q8IYA8 594 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SLC45A3Q96JT2 553 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 LHX5Q9H2C1 402 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CDK5RAP2Q96SN8 1893 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 A0A0A0MRY4 1105 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 BCLAF3A2AJT9 711 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 PRMT5O14744 637 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 MSH4O15457 936 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 GCATO75600 419 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 TFPTP0C1Z6 253 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SAT1P21673 171 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 EIF6P56537 245 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 RAB43Q86YS6 212 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SPATA13Q96N96 652 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF556Q9HAH1 456 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ING4Q9UNL4 249 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 C2orf71A6NGG8 1288 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 NFIBO00712 420 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SNX2O60749 519 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 NAMPTP43490 491 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 CRKP46108 304 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF143P52747 638 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 RPL10AP62906 217 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DAB2P98082 770 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SCN1BQ07699 218 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 ATG14Q6ZNE5 492 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 UBR7Q8N806 425 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 HDAC2Q92769 488 aaKnown RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 DHRS4Q9BTZ2 278 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 JPH1Q9HDC5 661 aaPredicted RBP6.66□□□□□ -1.34
TRIM38-201ENST00000357085 QPCTLQ9NXS2 382 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 COG5Q9UP83 839 aa6.66□□□□□ -1.34
TRIM38-201ENST00000357085 MN1Q10571 1320 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms