RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ATAT1Q5SQI0 421 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 LEKR1Q6ZMV7 388 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 ZNF354CQ86Y25 554 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 LRCH3Q96II8 777 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 MSLNLQ96KJ4 702 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 FAM161BQ96MY7 647 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 GBA3Q9H227 469 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 EPB41L4BQ9H329 900 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 TBC1D14Q9P2M4 693 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 CDH7Q9ULB5 785 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 OR51B4Q9Y5P0 310 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 PENKP01210 267 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 HLA-DQB2P05538 268 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 NFKB1P19838 968 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 IGFBP4P22692 258 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 FCARP24071 287 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 FDFT1P37268 417 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 SLC10A7Q0GE19 358 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 HNRNPDQ14103 355 aaKnown RBP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 CES5AQ6NT32 575 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 LRIG3Q6UXM1 1119 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ZNF783Q6ZMS7 281 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 EP400NLQ6ZTU2 488 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 MFN1Q8IWA4 741 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ST13P5Q8NFI4 369 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 UBLCP1Q8WVY7 318 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ALG14Q96F25 216 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ZIM3Q96PE6 472 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 MYADMQ96S97 322 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 SPON2Q9BUD6 331 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 SEMA4AQ9H3S1 761 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 TRPV4Q9HBA0 871 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 RBM22Q9NW64 420 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 KDELR3O43731 214 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 CACNG3O60359 315 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 APRTP07741 180 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 CDH18Q13634 790 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ANO4Q32M45 955 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 IL31Q6EBC2 164 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 CCDC25Q86WR0 208 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 TEX26Q8N6G2 289 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 IRF7Q92985 503 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 EXOC4Q96A65 974 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 OTUB2Q96DC9 234 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 RBM15Q96T37 977 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 FEM1AQ9BSK4 669 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 MUC3BQ9H195 1237 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ATP13A1Q9HD20 1204 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 MED4Q9NPJ6 270 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 SPHK2Q9NRA0 654 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 RSPH14Q9UHP6 348 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 ACTL7AQ9Y615 435 aa18.5■□□□□ 0.55
SMARCD3-202ENST00000356800 XIRP2A4UGR9 3374 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 CYBBP04839 570 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 NUDT17P0C025 328 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 TPSB2P20231 275 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 CSKP41240 450 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 OXCT1P55809 520 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 CBLBQ13191 982 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 TPSAB1Q15661 275 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 LY6G5CQ5SRR4 150 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 FNBP1LQ5T0N5 605 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 UBAP2Q5T6F2 1119 aaKnown RBP18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 ITPRIPL1Q6GPH6 555 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 KRT222Q8N1A0 295 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 KIAA1958Q8N8K9 716 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 FIBINQ8TAL6 211 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 LMLNQ96KR4 655 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 MLPHQ9BV36 600 aaPredicted RBP18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 FRMD8Q9BZ67 464 aaPredicted RBP18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 CDC42EP4Q9H3Q1 356 aaKnown RBP18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 GLOD4Q9HC38 313 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 PLAAQ9Y263 795 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 NFS1Q9Y697 457 aa18.49■□□□□ 0.55
SMARCD3-202ENST00000356800 HEPACAM2A8MVW5 462 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 SLC9A3R1O14745 358 aaPredicted RBP18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 ZMPSTE24O75844 475 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 RENBPP51606 427 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 TNK2Q07912 1038 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 LMAN2Q12907 356 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 HIF1AQ16665 826 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 MSS51Q4VC12 460 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 MARC1Q5VT66 337 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 TANGO2Q6ICL3 276 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 MICALL1Q8N3F8 863 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 PGBD5Q8N414 524 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 PDCD7Q8N8D1 485 aaKnown RBP18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 BPIFB1Q8TDL5 484 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 RUFY1Q96T51 708 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 SH3GL2Q99962 352 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 BBS2Q9BXC9 721 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 POMKQ9H5K3 350 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 DUS2Q9NX74 493 aaKnown RBP18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 EYSQ5T1H1 3165 aa18.48■□□□□ 0.55
SMARCD3-202ENST00000356800 NEDD8-MDP1E9PL57 170 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms