RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 C1QTNF3-AMACRE9PGA6 284 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 KIF1CO43896 1103 aaKnown RBP18.28■□□□□ 0.52
COL18A1-202ENST00000355480 CALCAP01258 141 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ABCG1P45844 678 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 GPR1P46091 355 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 POU5F2Q8N7G0 328 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 COL26A1Q96A83 441 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 FTHL17Q9BXU8 183 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 ENOPH1Q9UHY7 261 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 GNPTGQ9UJJ9 305 aa18.28■□□□□ 0.52
COL18A1-202ENST00000355480 EPN2O95208 641 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CSH1P0DML2 217 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CSH2P0DML3 217 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 IFNGR2P38484 337 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 MAP2K5Q13163 448 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 MSLNQ13421 630 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-202ENST00000355480 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 MTMR9Q96QG7 549 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 SAE1Q9UBE0 346 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-202ENST00000355480 GPSM3Q9Y4H4 160 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 E7ENQ6 273 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CLPTM1O96005 669 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 IFNA16P05015 189 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 ABL2P42684 1182 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 PFKFB4Q16877 469 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CYP2R1Q6VVX0 501 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 SELENOMQ8WWX9 145 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 KAT5Q92993 513 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 PURBQ96QR8 312 aaKnown RBP18.27■□□□□ 0.52
COL18A1-202ENST00000355480 TBCDQ9BTW9 1192 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.27■□□□□ 0.523e-7■■■□□ 16
COL18A1-202ENST00000355480 NDUFA13Q9P0J0 144 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 INVSQ9Y283 1065 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 PIPSLA2A3N6 862 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 TLX1P31314 330 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-202ENST00000355480 SNX32Q86XE0 403 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CYP4X1Q8N118 509 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 CXorf40BQ96DE9 158 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 MIR1-1HGQ9H1L0 117 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 RIBC2Q9H4K1 309 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 EVA1BQ9NVM1 165 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 SIK3Q9Y2K2 1263 aa18.27■□□□□ 0.52
COL18A1-202ENST00000355480 BCL9O00512 1426 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 A0A0A0MRY4 1105 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 CHURC1-FNTBB4DL54 471 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 TPP1O14773 563 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 PSMD10O75832 226 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 C4BPBP20851 252 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 STX4Q12846 297 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 USP41Q3LFD5 358 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 TTC7BQ86TV6 843 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 ZCCHC9Q8N567 271 aaKnown RBP18.27■□□□□ 0.51
COL18A1-202ENST00000355480 SPATA13Q96N96 652 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 ATP13A3Q9H7F0 1226 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 SLC27A5Q9Y2P5 690 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 SLIT1O75093 1534 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 PRKAG1P54619 331 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 STK32CQ86UX6 486 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 SIKE1Q9BRV8 207 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 ZYG11BQ9C0D3 744 aa18.27■□□□□ 0.51
COL18A1-202ENST00000355480 MAFO75444 373 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ADH1AP07327 375 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 PSEN1P49768 467 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 DEFB115Q30KQ5 88 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 NT5DC1Q5TFE4 455 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 PRR23CQ6ZRP0 262 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 HSFY1Q96LI6 401 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 SH3GL2Q99962 352 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 APOL4Q9BPW4 351 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 HDHD2Q9H0R4 259 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ZNHIT2Q9UHR6 403 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 NEK3P51956 506 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 BIKQ13323 160 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 STAG3L4Q8TBR4 150 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 LRRC39Q96DD0 335 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 C19orf60Q96EN9 201 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ANKZF1Q9H8Y5 726 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 RPRD1BQ9NQG5 326 aaKnown RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 SMIM31A0A1B0GVY4 71 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 LRRC14BA6NHZ5 514 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 DCXO43602 365 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 MAPK8P45983 427 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ZNF143P52747 638 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 MAMLD1Q13495 774 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 FAM20CQ8IXL6 584 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ITFG1Q8TB96 612 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 TLR10Q9BXR5 811 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 BPIFA1Q9NP55 256 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 CCDC189A1A4V9 331 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 PIGNO95427 931 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ADRB2P07550 413 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 CD52P31358 61 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms