RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CES5AQ6NT32 575 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 STK40Q8N2I9 435 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 PRCCQ92733 491 aaPredicted RBP13.4□□□□□ -0.26
SCN8A-202ENST00000355133 MARK4Q96L34 752 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 SOHLH2Q9NX45 425 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 IL1RAPL1Q9NZN1 696 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 BCL9O00512 1426 aa13.4□□□□□ -0.26
SCN8A-202ENST00000355133 ADCY6O43306 1168 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.27
SCN8A-202ENST00000355133 LDLRP01130 860 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 CNGA2Q16280 664 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 RAET1GQ6H3X3 334 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 HDDC2Q7Z4H3 204 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 GPR142Q7Z601 462 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.27
SCN8A-202ENST00000355133 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 SEMA6AQ9H2E6 1030 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 INVSQ9Y283 1065 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 GPSM3Q9Y4H4 160 aa13.4□□□□□ -0.27
SCN8A-202ENST00000355133 PIPSLA2A3N6 862 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CD52P31358 61 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 NAB1Q13506 487 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 INAQ16352 499 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 PROX1Q92786 737 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SERHLQ9NQF3 203 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ZMYM2Q9UBW7 1377 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 A0A0A0MRY4 1105 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 PAICSP22234 425 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 PAGE2BQ5JRK9 111 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 NEK10Q6ZWH5 1172 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 COLGALT2Q8IYK4 626 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CLYBLQ8N0X4 340 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ADI1Q9BV57 179 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 KLHL3Q9UH77 587 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ADAM30Q9UKF2 790 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 MRPS23Q9Y3D9 190 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 NDUFS2O75306 463 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 FAM58BPP0C7Q3 252 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 AMD1P17707 334 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 RPA3P35244 121 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 PIK3CGP48736 1102 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CAPSQ13938 189 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 MAGEC3Q8TD91 643 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SELENOMQ8WWX9 145 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SNRNP25Q9BV90 132 aaKnown RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CDT1Q9H211 546 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 GDF3Q9NR23 364 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ZNHIT2Q9UHR6 403 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 SLIT1O75093 1534 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 TRIM24O15164 1050 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 TSC22D2O75157 780 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ATP6V1G2O95670 118 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CDK7P50613 346 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 NEK3P51956 506 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ZNF143P52747 638 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-202ENST00000355133 IRF8Q02556 426 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 PIGZQ86VD9 579 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 HEATR4Q86WZ0 1026 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 ITFG1Q8TB96 612 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 GPR152Q8TDT2 470 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CLIP3Q96DZ5 547 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 UGT2B28Q9BY64 529 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 IL22Q9GZX6 179 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 MSRAQ9UJ68 235 aa13.39□□□□□ -0.27
SCN8A-202ENST00000355133 CBX6O95503 412 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CRATP43155 626 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 HAS1Q92839 578 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CHURC1-FNTBB4DL54 471 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CLDN5O00501 218 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 MEIS2O14770 477 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 EPN2O95208 641 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
SCN8A-202ENST00000355133 NUP62P37198 522 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-202ENST00000355133 GPR1P46091 355 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms