RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TSHRP16473 764 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 ZNF3P17036 446 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 CDH2P19022 906 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 CDKN2BP42772 138 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 PTPN5P54829 565 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 CACNB2Q08289 660 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 GALNT1Q10472 559 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 CUL2Q13617 745 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 HEATR4Q86WZ0 1026 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 PDSS2Q86YH6 399 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 ANGPTL6Q8NI99 470 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 ELMO3Q96BJ8 720 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 PCDH9Q9HC56 1237 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 ABI2Q9NYB9 513 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 TBC1D14Q9P2M4 693 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 ANKFY1Q9P2R3 1169 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 KCNN3Q9UGI6 736 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 AGO2Q9UKV8 859 aaKnown RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 H3BSA7 217 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 KLHL2O95198 593 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 POLR2CP19387 275 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 PSMA3P25788 255 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 P2RX3P56373 397 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 C21orf58P58505 322 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 LHX8Q68G74 356 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
SND1-201ENST00000354725 OR6Y1Q8NGX8 325 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 PLEKHA8Q96JA3 519 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 SCPEP1Q9HB40 452 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 C1orf112Q9NSG2 853 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 SACM1LQ9NTJ5 587 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 CEPT1Q9Y6K0 416 aa11.02□□□□□ -0.65
SND1-201ENST00000354725 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 VCLP18206 1134 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 ETV4P43268 484 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 OGDHQ02218 1023 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 THOC5Q13769 683 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 SPARCL1Q14515 664 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 STXBP5Q5T5C0 1151 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 FAM102BQ5T8I3 360 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 NDUFAF5Q5TEU4 345 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 SWSAP1Q6NVH7 229 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 OTOAQ7RTW8 1153 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 POLNQ7Z5Q5 900 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 VSIG10LQ86VR7 867 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 FEZF2Q8TBJ5 459 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 SGF29Q96ES7 293 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 TMA16Q96EY4 203 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 CCDC138Q96M89 665 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 CCDC77Q9BR77 488 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 SH2D3AQ9BRG2 576 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 TRABDQ9H4I3 376 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 KCNK9Q9NPC2 374 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 SLCO1B3Q9NPD5 702 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 DNAJC17Q9NVM6 304 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 CNTN3Q9P232 1028 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 IPPQ9Y573 584 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 RGS13O14921 159 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 HNRNPCL1O60812 293 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 RNGTTO60942 597 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 ZWINTO95229 277 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 ARIH2O95376 493 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 BTKQ06187 659 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■■□ 24.1
SND1-201ENST00000354725 BANPQ8N9N5 519 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 NCLNQ969V3 563 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 MRPL1Q9BYD6 325 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 FRMD8P1Q9BZ68 369 aaPredicted RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 PAIP1Q9H074 479 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 KCNK13Q9HB14 408 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 PARVAQ9NVD7 372 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 NDE1Q9NXR1 346 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 RWDD3Q9Y3V2 267 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 GSC2O15499 205 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 CLOCKO15516 846 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 DYNC1LI2O43237 492 aaPredicted RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 LSM8O95777 96 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 RAPH1Q70E73 1250 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 ARPINQ7Z6K5 226 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 DCAKDQ8WVC6 231 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 HEMGNQ9BXL5 484 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 MRPS26Q9BYN8 205 aaKnown RBP11.01□□□□□ -0.65
SND1-201ENST00000354725 SMYD2Q9NRG4 433 aa11.01□□□□□ -0.65
SND1-201ENST00000354725 EXOC1LA0A1B0GW35 172 aa11□□□□□ -0.65
SND1-201ENST00000354725 A8MXQ7 604 aa11□□□□□ -0.65
SND1-201ENST00000354725 H7C0C1 242 aa11□□□□□ -0.65
SND1-201ENST00000354725 DGAT1O75907 488 aa11□□□□□ -0.65
SND1-201ENST00000354725 EDN1P05305 212 aa11□□□□□ -0.65
SND1-201ENST00000354725 RAC2P15153 192 aa11□□□□□ -0.65
SND1-201ENST00000354725 ELNP15502 786 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms