RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 H3BNH8 94 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 CFLARO15519 480 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PSMD3O43242 534 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 DAB1O75553 588 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 VAPBO95292 243 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 CHRNGP07510 517 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 GRM5P41594 1212 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 HCAR3P49019 387 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 IRF9Q00978 393 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 SLC12A1Q13621 1099 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PPP2R5DQ14738 602 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 MAMDC4Q6UXC1 1216 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 CHSY3Q70JA7 882 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 KCNMB4Q86W47 210 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 TRIML2Q8N7C3 387 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 LINC01465Q8N7H1 131 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 OR52K1Q8NGK4 314 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 CEP70Q8NHQ1 597 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 NT5C3BQ969T7 300 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 EME1Q96AY2 570 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 VPS39Q96JC1 886 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 KLHL32Q96NJ5 620 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 VAT1Q99536 393 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 NUF2Q9BZD4 464 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 RHOJQ9H4E5 214 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PRDM12Q9H4Q4 367 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 TASP1Q9H6P5 420 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 VPS45Q9NRW7 570 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 DDX18Q9NVP1 670 aaKnown RBP11.61□□□□□ -0.55
CAPN9-202ENST00000354537 HACL1Q9UJ83 578 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PTBP2Q9UKA9 531 aaKnown RBP11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PCDHGB4Q9UN71 923 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 MYRFQ9Y2G1 1151 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 PCDHGB5Q9Y5G0 923 aa11.61□□□□□ -0.55
CAPN9-202ENST00000354537 ZSWIM8A7E2V4 1837 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 LRRC37A2A6NM11 1700 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 H3BSA7 217 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SBK3P0C264 359 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SLC7A1P30825 629 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 DPP6P42658 865 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 CLCN3P51790 818 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ATXN1P54253 815 aaKnown RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PKNOX1P55347 436 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 NUP107P57740 925 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 DNAJB13P59910 316 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PSME3P61289 254 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 IKBKEQ14164 716 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PTK2BQ14289 1009 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 UGP2Q16851 508 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 KIZQ2M2Z5 673 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 HSDL1Q3SXM5 330 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 BSPRYQ5W0U4 402 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ITPRIPL1Q6GPH6 555 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 CES3Q6UWW8 571 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 HACD2Q6Y1H2 254 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 LSMEM2Q8N112 164 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 DNAJC1Q96KC8 554 aaKnown RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 CCT7Q99832 543 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 EFHD1Q9BUP0 239 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ZDHHC2Q9UIJ5 367 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SCAF8Q9UPN6 1271 aaKnown RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 RNF11Q9Y3C5 154 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 MFHAS1Q9Y4C4 1052 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 NR2E3Q9Y5X4 410 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 TCRBV3S1A0A5B6 114 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ARHGEF37A1IGU5 675 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 C9IYK1 514 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 DCLK1O15075 740 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 CYP2B6P20813 491 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PTPN3P26045 913 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 GK3PQ14409 553 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PYROXD2Q8N2H3 581 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 PELI3Q8N2H9 469 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 TMEM130Q8N3G9 435 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ADAMTS16Q8TE57 1224 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 AGAP2Q99490 1192 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 FTHL17Q9BXU8 183 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 ANKRD60Q9BZ19 345 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 MAGEB5Q9BZ81 275 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 FAM49BQ9NUQ9 324 aa11.6□□□□□ -0.55
CAPN9-202ENST00000354537 KLHL8Q9P2G9 620 aaPredicted RBP11.6□□□□□ -0.55
CAPN9-202ENST00000354537 NEMP1O14524 444 aa11.59□□□□□ -0.55
CAPN9-202ENST00000354537 TRIM24O15164 1050 aa11.59□□□□□ -0.55
CAPN9-202ENST00000354537 ARIH2O95376 493 aa11.59□□□□□ -0.55
CAPN9-202ENST00000354537 GJB1P08034 283 aa11.59□□□□□ -0.55
CAPN9-202ENST00000354537 PCSK6P29122 969 aa11.59□□□□□ -0.55
CAPN9-202ENST00000354537 NOS2P35228 1153 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms