RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 C12orf66Q96MD2 445 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 DMTF1Q9Y222 760 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 DCLK1O15075 740 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 LCN1P1Q5VSP4 162 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 SDR16C5Q8N3Y7 309 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 POU5F2Q8N7G0 328 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PHF10Q8WUB8 498 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 TMEM68Q96MH6 324 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 DMGDHQ9UI17 866 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 WDR62O43379 1518 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 IPO13O94829 963 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 HMGCRP04035 888 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 RLN2P04090 185 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 STILQ15468 1287 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 OR2L2Q8NH16 312 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 TEX47Q8TBZ9 253 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 EXOC2Q96KP1 924 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 TUBB1Q9H4B7 451 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 GREM2Q9H772 168 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 APEX2Q9UBZ4 518 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 H7C2Y5 167 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 ATMINO43313 823 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 CPA3P15088 417 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 COILP38432 576 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PDK3Q15120 406 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 TRIM40Q6P9F5 258 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 C12orf56Q8IXR9 622 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 SPATA33Q96N06 139 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PRRG4Q9BZD6 226 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 ALDH8A1Q9H2A2 487 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 KCNN2Q9H2S1 579 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 ELAC1Q9H777 363 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PRDM8Q9NQV8 689 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 SAE1Q9UBE0 346 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PI4KBQ9UBF8 816 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 LOC100509620A0A075B734 347 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 CYP4B1P13584 511 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 CYP2A7P20853 494 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 WEE1P30291 646 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 SDC2P34741 201 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 TCF7P36402 384 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PRAMEF17Q5VTA0 474 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 ZNF772Q68DY9 489 aaPredicted RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 FAM98AQ8NCA5 519 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 RETREG1Q9H6L5 497 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 GPAMQ9HCL2 828 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 RABL2BQ9UNT1 228 aa8.14□□□□□ -1.11
SCN8A-201ENST00000354534 SAMD4AQ9UPU9 718 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 URB1O60287 2271 aaKnown RBP8.14□□□□□ -1.11
SCN8A-201ENST00000354534 PKNOX1P55347 436 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 MEA1Q16626 185 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 SLC20A1Q8WUM9 679 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 RAD51AP1Q96B01 352 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 C1GALT1C1Q96EU7 318 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 PRKAB2O43741 272 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CYP21A2P08686 494 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ACOT2P49753 483 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CDH4P55283 916 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 SPIBQ01892 262 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 UAP1L1Q3KQV9 507 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 PTAR1Q7Z6K3 402 aaPredicted RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 OR2L8Q8NGY9 312 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 TRIM9Q9C026 710 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ATF5Q9Y2D1 282 aaPredicted RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ANKDD1BA6NHY2 528 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 B8ZZF3 427 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GTPBP1O00178 669 aaKnown RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ZBTB5O15062 677 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GLP2RO95838 553 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 RBP3P10745 1247 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ZNF45Q02386 682 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ZNF227Q86WZ6 799 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CD300LFQ8TDQ1 290 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 AASSQ9UDR5 926 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GARTP22102 1010 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GRIA3P42263 894 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CENPCQ03188 943 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ZNF177Q13360 481 aaPredicted RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GOLGA7BQ2TAP0 167 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CBWD3Q5JTY5 395 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 BRMS1LQ5PSV4 323 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CBWD5Q5RIA9 395 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 AMIGO1Q86WK6 493 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 TBC1D21Q8IYX1 336 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 TSEN15Q8WW01 171 aaKnown RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ACE2Q9BYF1 805 aaPredicted RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 RHBGQ9H310 441 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 VPS51Q9UID3 782 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 AKAP8O43823 692 aaKnown RBP8.13□□□□□ -1.11
SCN8A-201ENST00000354534 GMFGO60234 142 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 NUAK1O60285 661 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 VNN2O95498 520 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 CNTFP26441 200 aa8.13□□□□□ -1.11
SCN8A-201ENST00000354534 ADD2P35612 726 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms