RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ROPN1Q9HAT0 212 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 PRDM16Q9HAZ2 1276 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 UBN1Q9NPG3 1134 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 HPS4Q9NQG7 708 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 FAM49BQ9NUQ9 324 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 KLK14Q9P0G3 267 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ANAPC5Q9UJX4 755 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 DNPEPQ9ULA0 475 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 TDRD15B5MCY1 1934 aaKnown RBP8.46□□□□□ -1.05
CD44-205ENST00000352818 ADAMTS9Q9P2N4 1935 aa8.46□□□□□ -1.05
CD44-205ENST00000352818 TLN1Q9Y490 2541 aaKnown RBP8.46□□□□□ -1.05
CD44-205ENST00000352818 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 TULP2O00295 520 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CYB561D2O14569 222 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 DAB1O75553 588 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 GABBR2O75899 941 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ABLIM3O94929 683 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PRAMEF12O95522 483 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 AGTP01019 485 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 THP07101 528 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 IVLP07476 585 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CCDC130P13994 396 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CR2P20023 1033 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 TGM2P21980 687 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 FGFR3P22607 806 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 TKTP29401 623 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 ADCY8P40145 1251 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 P2RY2P41231 377 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 RGS7P49802 495 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ATXN3P54252 364 aaPredicted RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 SLC8A3P57103 927 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 IFFO1Q0D2I5 559 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 GRSF1Q12849 480 aaKnown RBP eCLIP8.46□□□□□ -1.06
CD44-205ENST00000352818 LLGL1Q15334 1064 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 SMAD1Q15797 465 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 KRT71Q3SY84 523 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 TNFAIP8L3Q5GJ75 292 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 EFHC1Q5JVL4 640 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 KAZNQ674X7 775 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ANO7Q6IWH7 933 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CD300LGQ6UXG3 332 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 LPCAT2Q7L5N7 544 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 STRADAQ7RTN6 431 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 GSTA5Q7RTV2 222 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PRICKLE2Q7Z3G6 844 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 BNIPLQ7Z465 357 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PCGF5Q86SE9 256 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PSTKQ8IV42 348 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 ARID3BQ8IVW6 561 aaPredicted RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 MAP7D3Q8IWC1 876 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 SH2D3CQ8N5H7 860 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 KCTD6Q8NC69 237 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 OR2W6PQ8NHA6 318 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ACTL9Q8TC94 416 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 FAM172AQ8WUF8 416 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 RTP4Q96DX8 246 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PIWIL1Q96J94 861 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 UROC1Q96N76 676 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ZNF670Q9BS34 389 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CDC42EP4Q9H3Q1 356 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 CNOT10Q9H9A5 744 aaKnown RBP8.46□□□□□ -1.06
CD44-205ENST00000352818 GOLGA2P5Q9HBQ8 144 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 SLC12A6Q9UHW9 1150 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.06
CD44-205ENST00000352818 CLEC18AA5D8T8 446 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CFAP69A5D8W1 941 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CASTOR2A6NHX0 329 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 MCF2LO15068 1137 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 EIF3HO15372 352 aaKnown RBP eCLIP8.45□□□□□ -1.06
CD44-205ENST00000352818 CST8O60676 142 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 FBXO21O94952 628 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 TTC4O95801 387 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 LRG1P02750 347 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SHBGP04278 402 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CYP11A1P05108 521 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 MYL4P12829 197 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 PTPN1P18031 435 aaKnown RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 LMO2P25791 158 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 ATP5DP30049 168 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 HOXD12P35452 270 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CHKAP35790 457 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 GALK1P51570 392 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 IRAK1P51617 712 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CDH6P55285 790 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 PPP2R2AP63151 447 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 OTUD4Q01804 1114 aaKnown RBP8.45□□□□□ -1.06
CD44-205ENST00000352818 ROR1Q01973 937 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 GRIK3Q13003 919 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 SLC29A2Q14542 456 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 DPYSL2Q16555 572 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 CCDC142Q17RM4 750 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 DUOXA1Q1HG43 343 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 MAP7D1Q3KQU3 841 aa8.45□□□□□ -1.06
CD44-205ENST00000352818 ITPRIPL2Q3MIP1 535 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms