RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 DICER1Q9UPY3 1922 aaKnown RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 NEMP1O14524 444 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 FYNP06241 537 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 CYP2C9P11712 490 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 PPARGP37231 505 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 GRIA4P48058 902 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 PRKAA2P54646 552 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 TPI1P60174 286 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 SOX4Q06945 474 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 GRM3Q14832 879 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 TLR1Q15399 786 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 ZNF423Q2M1K9 1284 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 SV2CQ496J9 727 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 PIGGQ5H8A4 983 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 SETD3Q86TU7 594 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 NAT14Q8WUY8 206 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 HDAC11Q96DB2 347 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 FAM49AQ9H0Q0 323 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-202ENST00000352393 TASP1Q9H6P5 420 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 GOLGA2P5Q9HBQ8 144 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 LRRC4Q9HBW1 653 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 VCX3AQ9NNX9 186 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 CHRAC1Q9NRG0 131 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 SLC39A10Q9ULF5 831 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 NRCAMQ92823 1304 aa24.96■■□□□ 1.59
CPNE1-202ENST00000352393 MTSS1O43312 755 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 PIGNO95427 931 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 AMHP03971 560 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 HOXD8P13378 290 aaPredicted RBP24.95■■□□□ 1.59
CPNE1-202ENST00000352393 NFKB1P19838 968 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 EPHA3P29320 983 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 CCR10P46092 362 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 HCAR3P49019 387 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 HERC3Q15034 1050 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 CLEC20AQ6ZU45 233 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 TMEM126BQ8IUX1 230 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 ANKRD13AQ8IZ07 590 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 SIX6OS1Q8N1H7 587 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 MOCOSQ96EN8 888 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 BRD8Q9H0E9 1235 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 KLK14Q9P0G3 267 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 TRHDEQ9UKU6 1024 aa24.95■■□□□ 1.59
CPNE1-202ENST00000352393 SMIM31A0A1B0GVY4 71 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 HUS1O60921 280 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 CABYRO75952 493 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 PRKAA1Q13131 559 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 ARL13AQ5H913 290 aaPredicted RBP24.95■■□□□ 1.58
CPNE1-202ENST00000352393 INTS6LQ5JSJ4 861 aaKnown RBP24.95■■□□□ 1.58
CPNE1-202ENST00000352393 ITPRIPL1Q6GPH6 555 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 ZC3HC1Q86WB0 502 aaKnown RBP24.95■■□□□ 1.58
CPNE1-202ENST00000352393 OSMRQ99650 979 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 APOL2Q9BQE5 337 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 SGIP1Q9BQI5 828 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 RIMS3Q9UJD0 308 aa24.95■■□□□ 1.58
CPNE1-202ENST00000352393 MMP3P08254 477 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 KCNE1P15382 129 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 XRCC1P18887 633 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-202ENST00000352393 NMBRP28336 390 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 ADSLP30566 484 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-202ENST00000352393 GALNT2Q10471 571 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 CYLC2Q14093 348 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-202ENST00000352393 ADGRE1Q14246 886 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 FLOT2Q14254 428 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 XKR4Q5GH76 650 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 MOB2Q70IA6 237 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 RCN3Q96D15 328 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 RHOJQ9H4E5 214 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 ACSS2Q9NR19 701 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 UNCXA6NJT0 531 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 NRP1O14786 923 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 LSAMPQ13449 338 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 ZFP1Q6P2D0 407 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 LCA5Q86VQ0 697 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 SULF1Q8IWU6 871 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 PGAM4Q8N0Y7 254 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 TOP6BLQ8N6T0 577 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 STYXQ8WUJ0 223 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 PPP1R36Q96LQ0 422 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 CDRT15Q96T59 188 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-202ENST00000352393 NSMCE4AQ9NXX6 385 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 VTI1BQ9UEU0 232 aa24.94■■□□□ 1.58
CPNE1-202ENST00000352393 MAGED2Q9UNF1 606 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-202ENST00000352393 XPOTO43592 962 aaKnown RBP24.93■■□□□ 1.58
CPNE1-202ENST00000352393 DNAJA2O60884 412 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 DARSP14868 501 aaKnown RBP24.93■■□□□ 1.58
CPNE1-202ENST00000352393 TKTL1P51854 596 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 CCNA1P78396 465 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 BIRC2Q13490 618 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 RARS2Q5T160 578 aaKnown RBP24.93■■□□□ 1.58
CPNE1-202ENST00000352393 SATL1Q86VE3 508 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 TICAM1Q8IUC6 712 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 ADAM32Q8TC27 787 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 NUF2Q9BZD4 464 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 TLK1Q9UKI8 766 aa24.93■■□□□ 1.58
CPNE1-202ENST00000352393 TARM1B6A8C7 271 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 C9IYK1 514 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 SLC35E2BP0CK96 405 aa24.92■■□□□ 1.58
CPNE1-202ENST00000352393 ETS2P15036 469 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms