RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 NMBRP28336 390 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 CXCR3P49682 368 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 PRKAA2P54646 552 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 TBL3Q12788 808 aaKnown RBP22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 OLFML2BQ68BL8 750 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 RAPH1Q70E73 1250 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 LINC00523Q86TU6 105 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 FBXW8Q8N3Y1 598 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 MAPK15Q8TD08 544 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 VCX3BQ9H321 246 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 TCF7L2Q9NQB0 619 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 TLK1Q9UKI8 766 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 SLC39A10Q9ULF5 831 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 POMPQ9Y244 141 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 JCHAINP01591 159 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 GLDCP23378 1020 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 CSRP3P50461 194 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 HK2P52789 917 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 HNRNPDQ14103 355 aaKnown RBP22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 ACVR1CQ8NER5 493 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 TSNARE1Q96NA8 513 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 ACE2Q9BYF1 805 aaPredicted RBP22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 TKTL2Q9H0I9 626 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 CPSF2Q9P2I0 782 aaKnown RBP22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 RAP2CQ9Y3L5 183 aa22.38■■□□□ 1.17
NKX2-4-201ENST00000351817 SMIM24O75264 130 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 LRIG2O94898 1065 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 ZNF865P0CJ78 1059 aaPredicted RBP22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 COG7P83436 770 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 GRM3Q14832 879 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 ZYG11AQ6WRX3 759 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 LCA5Q86VQ0 697 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 CCDC124Q96CT7 223 aaKnown RBP22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 TSC22D3Q99576 134 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 KIFC1Q9BW19 673 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 RHOJQ9H4E5 214 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 TASP1Q9H6P5 420 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 TMEM30AQ9NV96 361 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 ZDHHC7Q9NXF8 308 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 SNX10Q9Y5X0 201 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 HHLA1C9JL84 531 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 LYNP07948 512 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 HUNKP57058 714 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 LIPMQ5VYY2 423 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 ZC3HC1Q86WB0 502 aaKnown RBP22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 ZSCAN18Q8TBC5 510 aaPredicted RBP22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 EDEM1Q92611 657 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 DPF3Q92784 378 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 DRC3Q9H069 523 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 UBP1Q9NZI7 540 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 CDH9Q9ULB4 789 aa22.37■■□□□ 1.17
NKX2-4-201ENST00000351817 CCDC189A1A4V9 331 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 C17orf102A2RUQ5 167 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 MATN2O00339 956 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 SORBS2O94875 1100 aaKnown RBP22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 UBTFL6P0CB48 400 aaPredicted RBP22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 MTTPP55157 894 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 ZNF33AQ06730 810 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 IRF5Q13568 498 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 CCL14Q16627 93 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 RNF220Q5VTB9 566 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 PM20D1Q6GTS8 502 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 DCLRE1AQ6PJP8 1040 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 BHLHA9Q7RTU4 235 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 CTU1Q7Z7A3 348 aaKnown RBP22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 HPS6Q86YV9 775 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 KLHDC8BQ8IXV7 354 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 SMARCD1Q96GM5 515 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 TSGA13Q96PP4 275 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 OR52B2Q96RD2 323 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 C1QTNF1Q9BXJ1 281 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 CACNG4Q9UBN1 327 aa22.36■■□□□ 1.17
NKX2-4-201ENST00000351817 ZMPSTE24O75844 475 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 CABYRO75952 493 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 FESP07332 822 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 MYL3P08590 195 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 PEX6Q13608 980 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 RNF111Q6ZNA4 994 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 PDSS2Q86YH6 399 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 TRAPPC9Q96Q05 1148 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 APBA2Q99767 749 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 SSX2IPQ9Y2D8 614 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 TIMM13Q9Y5L4 95 aaPredicted RBP22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 GOLGA8TH3BQL2 631 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 CLGNO14967 610 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 HDAC3O15379 428 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 AHCYL1O43865 530 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 SRGAP2BP0DMP2 458 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 THRAP10827 490 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 MPSTP25325 297 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 DNAJB1P25685 340 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 RPL14P50914 215 aaKnown RBP22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 XIAPP98170 497 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 USP10Q14694 798 aaKnown RBP22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 AGR3Q8TD06 166 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 IRGQQ8WZA9 623 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 CNDP1Q96KN2 507 aa22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 LENG8Q96PV6 779 aaPredicted RBP22.35■■□□□ 1.17
NKX2-4-201ENST00000351817 CACNG3O60359 315 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms