RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PDPRQ8NCN5 879 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CMASQ8NFW8 434 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 LMO3Q8TAP4 145 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 JPH3Q8WXH2 748 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 PKD2L2Q9NZM6 624 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SAE1Q9UBE0 346 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ATP6V1G2-DDX39BF2Z307 99 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SLC22A1O15245 554 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MTSS1O43312 755 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MED24O75448 989 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 RFPL1O75677 317 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 NCAM1P13591 858 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 OR3A3P47888 321 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 DSTNP60981 165 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 B2MP61769 119 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 FPGSQ05932 587 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 HERC3Q15034 1050 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CDK10Q15131 360 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CEP55Q53EZ4 464 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 C16orf89Q6UX73 402 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SLCO6A1Q86UG4 719 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 PSMA8Q8TAA3 256 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SLCO4A1Q96BD0 722 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MASTLQ96GX5 879 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CCDC120Q96HB5 630 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ADI1Q9BV57 179 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MKRN2Q9H000 416 aaKnown RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 LHPPQ9H008 270 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ATP13A2Q9NQ11 1180 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 C20orf96Q9NUD7 363 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MAT2BQ9NZL9 334 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 LAMB2P55268 1798 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 TRIM64A6NGJ6 449 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 BCAS1O75363 584 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MYF6P23409 242 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SLC9A3P48764 834 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 NRLP54845 237 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 GDF10P55107 478 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 PLCL1Q15111 1095 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 KIZQ2M2Z5 673 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 PARP8Q8N3A8 854 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 RAB2BQ8WUD1 216 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 HDAC11Q96DB2 347 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MBOAT7Q96N66 472 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 UQCC2Q9BRT2 126 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 WDR41Q9HAD4 459 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 WARS2Q9UGM6 360 aaKnown RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ZNF195O14628 629 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 AXIN1O15169 862 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 RAD51BO15315 384 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 PHGDHO43175 533 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 XYLBO75191 536 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 UGT2B4P06133 528 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TCF4P15884 667 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ATF4P18848 351 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 FMO4P31512 558 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 DSC3Q14574 896 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SNX17Q15036 470 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SLC9B1Q4ZJI4 515 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SPATC1Q76KD6 591 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 FBXL6Q8N531 539 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SLC10A4Q96EP9 437 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 CFAP36Q96G28 342 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 METTL2AQ96IZ6 378 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 IDI2Q9BXS1 227 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 EIF3LQ9Y262 564 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SNCAIPQ9Y6H5 919 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 FAM149AA5PLN7 773 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 VWA5AO00534 786 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 AVILO75366 819 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 PIK3R1P27986 724 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 CCND2P30279 289 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 HIBADHP31937 336 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 HTR2BP41595 481 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ARPP19P56211 112 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 MAP3K7CLP57077 242 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TRIM32Q13049 653 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TRPC3Q13507 836 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TAF5Q15542 800 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SBK1Q52WX2 424 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 MROH9Q5TGP6 573 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 MBLAC2Q68D91 279 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 DESI1Q6ICB0 168 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 HID1Q8IV36 788 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 CCDC103Q8IW40 242 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TPH2Q8IWU9 490 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 GALNT12Q8IXK2 581 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 FAM109AQ8N4B1 249 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 SGCDQ92629 289 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 OR52B2Q96RD2 323 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 PIGSQ96S52 555 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms