RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CCDC142Q17RM4 750 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 IER5Q5VY09 327 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 KRT79Q5XKE5 535 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 C11orf88Q6PI97 169 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 MOXD1Q6UVY6 613 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 STX12Q86Y82 276 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 ZNF713Q8N859 430 aaPredicted RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 C1orf162Q8NEQ5 155 aaPredicted RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 FAM216AQ8WUB2 273 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 MTERF3Q96E29 417 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 EYA3Q99504 573 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 NLNQ9BYT8 704 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 PDGFDQ9GZP0 370 aaPredicted RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 CDCP1Q9H5V8 836 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 C6orf50Q9HD87 102 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 PEMTQ9UBM1 199 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 PASKQ96RG2 1323 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 USP12O75317 370 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 FYNP06241 537 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 LCP1P13796 627 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 NCF1P14598 390 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 HOXB1P14653 301 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 PRCPP42785 496 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 NPBWR1P48145 328 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 RAD23BP54727 409 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MEA1Q16626 185 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CFAP157Q5JU67 520 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MLIPQ5VWP3 458 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ACAD10Q6JQN1 1059 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF790Q6PG37 636 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 BZW1Q7L1Q6 419 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CCDC25Q86WR0 208 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PNPT1Q8TCS8 783 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 AKAP1Q92667 903 aaKnown RBP eCLIP6.08□□□□□ -1.444e-9■■■■■ 32.4
RFC1-201ENST00000349703 NXNL1Q96CM4 212 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 OMA1Q96E52 524 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 NAF1Q96HR8 494 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 NACC1Q96RE7 527 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ELF4Q99607 663 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CCDC86Q9H6F5 360 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 CACNA1FO60840 1977 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 DLG5Q8TDM6 1919 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ESYT2A0FGR8 921 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 AGPSO00116 658 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MGRN1O60291 552 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 WFS1O76024 890 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 OAZ2O95190 189 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 H2AFZP0C0S5 128 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 RPL13P26373 211 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 GNA11P29992 359 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PMS2P54278 862 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 TPTEP56180 551 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PKN1Q16512 942 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF805Q5CZA5 627 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 Q5PR19 223 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 TMEM65Q6PI78 240 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 STXBP4Q6ZWJ1 553 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 H2AFVQ71UI9 128 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF572Q7Z3I7 529 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF280BQ86YH2 543 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ADSSL1Q8N142 457 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ANKRD35Q8N283 1001 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PCYOX1LQ8NBM8 494 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 STYXQ8WUJ0 223 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 SELENOMQ8WWX9 145 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CEP19Q96LK0 163 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 FCRL3Q96P31 734 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 KIFC3Q9BVG8 833 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PUS3Q9BZE2 481 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 HSD3B7Q9H2F3 369 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 HCSTQ9UBK5 93 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 NENFQ9UMX5 172 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CPS1P31327 1500 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CCDC160A6NGH7 325 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PPIP5K2O43314 1243 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 HNRNPRO43390 633 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 NPTXRO95502 500 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CHN1P15882 459 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PFKLP17858 780 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 SLC12A2P55011 1212 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ARL4CP56559 192 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 POU6F2P78424 691 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 DR1Q01658 176 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PRKCEQ02156 737 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 TMEM119Q4V9L6 283 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZBTB41Q5SVQ8 909 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MRPL14Q6P1L8 145 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 C16orf59Q7L2K0 433 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 OR2C3Q8N628 320 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 OR14K1Q8NGZ2 314 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 LRRC8CQ8TDW0 803 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 GDPD5Q8WTR4 605 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZFAND2BQ8WV99 257 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CASKIN2Q8WXE0 1202 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 JADE3Q92613 823 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms