RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 GCATO75600 419 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 UQCRBP14927 111 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 TARSP26639 723 aaKnown RBP15.66■□□□□ 0.1
PTPRO-202ENST00000348962 PSMB4P28070 264 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 NTSP30990 170 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 KCNMA1Q12791 1236 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 POM121L1PQ3SYA9 428 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 PPP1R15BQ5SWA1 713 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 AFTPHQ6ULP2 937 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 CCDC81Q6ZN84 652 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 RIN3Q8TB24 985 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 CCT7Q99832 543 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 DNAJC18Q9H819 358 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 NDUFAF1Q9Y375 327 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
PTPRO-202ENST00000348962 SMIM28A0A1B0GU29 152 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 SGTAO43765 313 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 NFATC1O95644 943 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 ENO2P09104 434 aaPredicted RBP15.66■□□□□ 0.1
PTPRO-202ENST00000348962 NOS3P29474 1203 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 DNAJC9Q8WXX5 260 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 YIPF3Q9GZM5 350 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 PRDM12Q9H4Q4 367 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 NRDE2Q9H7Z3 1164 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 PRKAG3Q9UGI9 489 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 TAGLN3Q9UI15 199 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 SNX13Q9Y5W8 968 aa15.66■□□□□ 0.1
PTPRO-202ENST00000348962 FYNP06241 537 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 JAK1P23458 1154 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 ABL2P42684 1182 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 C21orf59P57076 290 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 SYT12Q8IV01 421 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 MAML3Q96JK9 1138 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 TMEM237Q96Q45 408 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 ABCG4Q9H172 646 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 THAP1Q9NVV9 213 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 AGO1Q9UL18 857 aaKnown RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 PCDHA2Q9Y5H9 948 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 LRRC10BA6NIK2 292 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 CHADO15335 359 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 RIPK2O43353 540 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 CALB2P22676 271 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 SLC1A6P48664 564 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 AIF1P55008 147 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 UGCGQ16739 394 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 KLHL35Q6PF15 583 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 PHF13Q86YI8 300 aaPredicted RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 APOPT1Q96IL0 206 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 TREHO43280 583 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 ERCC2P18074 760 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 S100A3P33764 101 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 DYNC1I2Q13409 638 aaKnown RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 RASA2Q15283 850 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 PRMT9Q6P2P2 845 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 PRR23CQ6ZRP0 262 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 KCTD14Q9BQ13 255 aaPredicted RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 RHBGQ9H310 441 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 ZC4H2Q9NQZ6 224 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
PTPRO-202ENST00000348962 CLDN11O75508 207 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 SLC35G4P0C7Q5 338 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 NFKB1P19838 968 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 CRYMQ14894 314 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 VN1R5Q7Z5H4 357 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 C7orf61Q8IZ16 206 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 OR52K1Q8NGK4 314 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 NSMCE2Q96MF7 247 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 TMEM120AQ9BXJ8 343 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 CFAP97Q9P2B7 532 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 POLR1DQ9Y2S0 133 aa15.65■□□□□ 0.1
PTPRO-202ENST00000348962 A0A0B4J269 797 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 YDJCA8MPS7 323 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 IFNA16P05015 189 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 NCF4Q15080 339 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 ZNHIT3Q15649 155 aaPredicted RBP15.64■□□□□ 0.09
PTPRO-202ENST00000348962 SELENOMQ8WWX9 145 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 RSPH1Q8WYR4 309 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 FAIM2Q9BWQ8 316 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TLR10Q9BXR5 811 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TMCO1Q9UM00 188 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3DA0A087WVF3 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3IA0A087WXS9 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3EA0A087X179 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3KA0A087X1G2 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3FA6NER0 549 aaPredicted RBP15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3LB9A6J9 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 OPLAHO14841 1288 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 B4GALT4O60513 344 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3HP0C7X1 549 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 LPOP22079 712 aaPredicted RBP15.64■□□□□ 0.09
PTPRO-202ENST00000348962 RPL21P46778 160 aaKnown RBP15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TAF10Q12962 218 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 SLC9A5Q14940 896 aa15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TRIP4Q15650 581 aaPredicted RBP15.64■□□□□ 0.09
PTPRO-202ENST00000348962 TBC1D3GQ6DHY5 549 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms