RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 VPS13AQ96RL7 3174 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 MUC22E2RYF6 1773 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 GON4LQ3T8J9 2241 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 LNP1A1A4G5 178 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PATE3B3GLJ2 98 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 FSBPO95073 299 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PRNPP04156 253 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 DNA2P51530 1060 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 YBEYP58557 167 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PIGHQ14442 188 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 TEAD4Q15561 434 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PSTKQ8IV42 348 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PCDH20Q8N6Y1 951 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 RTL3Q8N8U3 475 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 OR14C36Q8NHC7 312 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 DNASE2BQ8WZ79 361 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 SKA1Q96BD8 255 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PPP1R16AQ96I34 528 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PSMB7Q99436 277 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 GTPBP2Q9BX10 602 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 ZDHHC5Q9C0B5 715 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 PCSK1NQ9UHG2 260 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 IP6K2Q9UHH9 426 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 EIF2B4Q9UI10 523 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 LCMT1Q9UIC8 334 aa16.12■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM72CH0Y354 149 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 MYO1FO00160 1098 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 EEF2KO00418 725 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 BCAT2O15382 392 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 SLC7A4O43246 635 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 AKR1B10O60218 316 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 ENGP17813 658 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 KCNA4P22459 653 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 MAOBP27338 520 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 SERPINH1P50454 418 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 OGDHQ02218 1023 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 PARP15Q460N3 678 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM72AQ5TYM5 149 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 KIAA0895LQ68EN5 471 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM72DQ6L9T8 149 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 C22orf39Q6P5X5 142 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 LINGO4Q6UY18 593 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 NLRP14Q86W24 1093 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM72BQ86X60 149 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 VSTM4Q8IW00 320 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 PYROXD2Q8N2H3 581 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 OR2T34Q8NGX1 318 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 PIP4K2CQ8TBX8 421 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 CTNNBL1Q8WYA6 563 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 CEP192Q8TEP8 1941 aa16.11■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3DA0A087WVF3 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3IA0A087WXS9 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 A0A087X0T9 212 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3EA0A087X179 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3KA0A087X1G2 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3FA6NER0 549 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 C4orf47A7E2U8 309 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3LB9A6J9 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 KPNA3O00505 521 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 MT-CO1P00395 513 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3HP0C7X1 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM228BP0C875 321 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 VAV1P15498 845 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 MIPP30301 263 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 CHRNA3P32297 505 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 PCK1P35558 622 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 EIF4A3P38919 411 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ARL4AP40617 200 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 MAPK8P45983 427 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 RAD51Q06609 339 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 BOLA3Q53S33 107 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3GQ6DHY5 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3CQ6IPX1 549 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 IL27RAQ6UWB1 636 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 DNAAF5Q86Y56 855 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TBC1D3Q8IZP1 549 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 RYBPQ8N488 228 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ZCCHC9Q8N567 271 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 TMIEQ8NEW7 156 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ARHGEF2Q92974 986 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 CCDC42Q96M95 316 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 NUP85Q9BW27 656 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 THAP2Q9H0W7 228 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 C6orf106Q9H6K1 298 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ZWILCHQ9H900 591 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ARHGAP20Q9P2F6 1191 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ZNF212Q9UDV6 495 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 IL36AQ9UHA7 158 aa16.1■□□□□ 0.17
TSPAN4-201ENST00000346501 ANAPC7Q9UJX3 599 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms