RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ABL2P42684 1182 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 COG7P83436 770 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 PARP6Q2NL67 630 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 INTS6LQ5JSJ4 861 aaKnown RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 FSTL4Q6MZW2 842 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 ADGRD1Q6QNK2 874 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 DDI1Q8WTU0 396 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 VPS28Q9UK41 221 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 TEX264Q9Y6I9 313 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 PABPN1LA6NDY0 278 aaKnown RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 PRR23AA6NEV1 266 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 F9P00740 461 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 MPSTP25325 297 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 GCAP28676 217 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 WNT3AP56704 352 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 USP46P62068 366 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 SLC10A7Q0GE19 358 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 DPYSL2Q16555 572 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 PLEKHG4Q58EX7 1191 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 DEFB107AQ8IZN7 70 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 TOP6BLQ8N6T0 577 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 ZMIZ2Q8NF64 920 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 XPR1Q9UBH6 696 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 STAMBPO95630 424 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 PGAM1P18669 254 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 ACVRL1P37023 503 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 CDH17Q12864 832 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 KCNJ11Q14654 390 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 CLNKQ7Z7G1 428 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 HMCESQ96FZ2 354 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 RPL10LQ96L21 214 aaKnown RBP13.53□□□□□ -0.24
CASC4-202ENST00000345795 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 AURKAO14965 403 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 CCDC22O60826 627 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 DAB1O75553 588 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 FSBPO95073 299 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 UNC5CO95185 931 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 ARSAP15289 507 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 STMN1P16949 149 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 NR2C2P49116 596 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 IL1RL1Q01638 556 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.24
CASC4-202ENST00000345795 PDE1CQ14123 709 aaPredicted RBP13.52□□□□□ -0.24
CASC4-202ENST00000345795 ANKRD20A4Q4UJ75 823 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 TEX44Q53QW1 395 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 ALFQ53S48 1182 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 STRADAQ7RTN6 431 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 TRIM42Q8IWZ5 723 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 CRYBG2Q8N1P7 616 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 PCDH20Q8N6Y1 951 aaKnown RBP13.52□□□□□ -0.24
CASC4-202ENST00000345795 CERS4Q9HA82 394 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 ATP13A1Q9HD20 1204 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 CCDC167Q9P0B6 97 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 PHIPQ8WWQ0 1821 aa13.52□□□□□ -0.24
CASC4-202ENST00000345795 COL1A2P08123 1366 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 KATNA1O75449 491 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 PRSS56P0CW18 603 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 CCDC166P0CW27 439 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 PAMP19021 973 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 FMO4P31512 558 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.25
CASC4-202ENST00000345795 BANPQ8N9N5 519 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
CASC4-202ENST00000345795 NXNL1Q96CM4 212 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 FCRL3Q96P31 734 aaPredicted RBP13.52□□□□□ -0.25
CASC4-202ENST00000345795 PPP1R10Q96QC0 940 aaKnown RBP13.52□□□□□ -0.25
CASC4-202ENST00000345795 EGFL8Q99944 293 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 SMG9Q9H0W8 520 aaKnown RBP13.52□□□□□ -0.25
CASC4-202ENST00000345795 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 PCDHA11Q9Y5I1 949 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 HTTP42858 3142 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 SUPT3HB4E1H0 165 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 F5H5T6 163 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 SUPT3HO75486 399 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 FBXO21O94952 628 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 CDH18Q13634 790 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 FUT11Q495W5 492 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 PIGWQ7Z7B1 504 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 UBR7Q8N806 425 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 ACOT9Q9Y305 439 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
CASC4-202ENST00000345795 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
CASC4-202ENST00000345795 MYL4P12829 197 aa13.51□□□□□ -0.25
CASC4-202ENST00000345795 BTKQ06187 659 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms