RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 CRADDP78560 199 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 METTL7BQ6UX53 244 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ADSSL1Q8N142 457 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 NMD3Q96D46 503 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 NOL6Q9H6R4 1146 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KIAA1257Q9ULG3 409 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 OR7A10O76100 309 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 VAPBO95292 243 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF7P17097 686 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 PSMD4P55036 377 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ARMC3Q5W041 872 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KRT74Q7RTS7 529 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 SEMA6AQ9H2E6 1030 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 C1orf232A0A0U1RR37 186 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KPNA5O15131 536 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 PSTPIP1O43586 416 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF470Q6ECI4 717 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 BNC2Q6ZN30 1099 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF677Q86XU0 584 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 METTL6Q8TCB7 284 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 EQTNQ9NQ60 294 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 LOC100506127A0A0U1RQW1 187 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 SH3D21A4FU49 640 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■□□□□ 10.5
TRIOBP-202ENST00000344404 DNTTP04053 509 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 RPL9P32969 192 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 EFCAB1Q9HAE3 211 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KLQ9UEF7 1012 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 F9P00740 461 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 MPOP05164 745 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 CYP11B2P19099 503 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 RENBPP51606 427 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 CENPCQ03188 943 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 SCIMPQ6UWF3 145 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 FAM129CQ86XR2 697 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 SMPDL3BQ92485 455 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 RACGAP1Q9H0H5 632 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 DUSP10Q9Y6W6 482 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 MUTP22033 750 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TLX1P31314 330 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 NFE2Q16621 373 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 PRSS58Q8IYP2 241 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 GPER1Q99527 375 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 ARHGAP28Q9P2N2 729 aa12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
TRIOBP-202ENST00000344404 TRIM66O15016 1216 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 GABRR2P28476 465 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 OMPP47874 163 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CCT3P49368 545 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ERP44Q9BS26 406 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 TMPRSS4Q9NRS4 437 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RRM1P23921 792 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 IGFALSP35858 605 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 IFNGR2P38484 337 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CD86P42081 329 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 POLR2LP62875 67 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 FOXM1Q08050 763 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ATP13A4Q4VNC1 1196 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 GPR158Q5T848 1215 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 LNX2Q8N448 690 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CCDC54Q8NEL0 328 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CCDC126Q96EE4 140 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 LGMNQ99538 433 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 FAM92AA1XBS5 289 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 PDE5AO76074 875 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 PPATQ06203 517 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 AMZ1Q400G9 498 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 PTPN20Q4JDL3 420 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 FAM98BQ52LJ0 330 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 WSCD1Q658N2 575 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 KRT73Q86Y46 540 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 GPSM1Q86YR5 675 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 SLC41A1Q8IVJ1 513 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF248Q8NDW4 579 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CMTM6Q9NX76 183 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RABGEF1Q9UJ41 708 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 WBP11Q9Y2W2 641 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms