RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MAB21L3Q8N8X9 362 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 RPLP0P6Q8NHW5 317 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PCDH19Q8TAB3 1148 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 GIPC2Q8TF65 315 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 UBLCP1Q8WVY7 318 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 GATA6Q92908 595 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 SH3GL2Q99962 352 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 P2RY13Q9BPV8 354 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 FBXO44Q9H4M3 255 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 FAM204AQ9H8W3 233 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ABCC13Q9NSE7 274 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PIGVQ9NUD9 493 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ANAPC5Q9UJX4 755 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ABCA7Q8IZY2 2146 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 WDFY3Q8IZQ1 3526 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 AGPSO00116 658 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 CEACAM1P13688 526 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 GGCXP38435 758 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 NR2C2P49116 596 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 VPS41P49754 854 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 CDR1P51861 262 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 PMS2P54278 862 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 FAM193AP78312 1265 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 CBX1P83916 185 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 NME3Q13232 169 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 XRCC4Q13426 336 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 DMC1Q14565 340 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 PDGFRLQ15198 375 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 UAP1Q16222 522 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 TAF12Q16514 161 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 P3H1Q32P28 736 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 BSPRYQ5W0U4 402 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 PMS2CLQ68D20 193 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 HIBCHQ6NVY1 386 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 SCN4BQ8IWT1 228 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 NUP93Q8N1F7 819 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 ARHGAP18Q8N392 663 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 EXOC4Q96A65 974 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 ACDQ96AP0 544 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 CSPG4P5Q96PW8 444 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 TMEM121Q9BTD3 319 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 DDIT4Q9NX09 232 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 PLAAQ9Y263 795 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 ATRXP46100 2492 aa13.84□□□□□ -0.19
HERPUD1-202ENST00000344114 SYNJ2BP-COX16A0A087WUM0 186 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SMAPO00193 183 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 CDX4O14627 284 aaPredicted RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 ZNF189O75820 626 aaPredicted RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 RTN3O95197 1032 aaPredicted RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 TOP3BO95985 862 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 RARGP13631 454 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SPINK2P20155 84 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 STIP1P31948 543 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 ADRA1BP35368 520 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 EIF3BP55884 814 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 MORF4L2Q15014 288 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 BTBD8Q5XKL5 378 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 TXNDC8Q6A555 127 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 DARS2Q6PI48 645 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 NPNTQ6UXI9 565 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 BZW1Q7L1Q6 419 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 C11orf74Q86VG3 221 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 MON1AQ86VX9 555 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 CDKL3Q8IVW4 592 aaPredicted RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 RNF139Q8WU17 664 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 ECT2Q9H8V3 914 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 TMEM9BQ9NQ34 198 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 COMMD8Q9NX08 183 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 CWC15Q9P013 229 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 COX16Q9P0S2 106 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SAE1Q9UBE0 346 aaPredicted RBP13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SHOC2Q9UQ13 582 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 SCML2Q9UQR0 700 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 ATP8A1Q9Y2Q0 1164 aa13.83□□□□□ -0.19
HERPUD1-202ENST00000344114 PLXND1Q9Y4D7 1925 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 H7C0C1 242 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 TP73O15350 636 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 IRAK2O43187 625 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 IFNB1P01574 187 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 IGLV3-25P01717 112 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 ATP5OP48047 213 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 CXCR3P49682 368 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 GPS1Q13098 491 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 ZNF77Q15935 545 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 KCTD19Q17RG1 926 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 BRMS1LQ5PSV4 323 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 NCBP2-AS2Q69YL0 99 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 TRMT10CQ7L0Y3 403 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 TAC4Q86UU9 113 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 HOOK3Q86VS8 718 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 RASSF3Q86WH2 238 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 CPA6Q8N4T0 437 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 SCAMP5Q8TAC9 235 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms