RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 C3orf49Q96BT1 292 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KANSL2Q9H9L4 492 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 B4E1Z4 1266 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HTR2AP28223 471 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CCND2P30279 289 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FHITP49789 147 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ADGRE1Q14246 886 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 LLGL2Q6P1M3 1020 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KDELC2Q7Z4H8 507 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EMC1Q8N766 993 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MYLPFQ96A32 169 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 C12orf43Q96C57 262 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM138Q9NPI0 162 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ANKMY1Q9P2S6 941 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SNX13Q9Y5W8 968 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 IFNGR2P38484 337 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 VASPP50552 380 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GUK1Q16774 197 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PFKFB3Q16875 520 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MSANTD2Q6P1R3 559 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PROSER2Q86WR7 435 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FOXRED2Q8IWF2 684 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HDHD2Q9H0R4 259 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ABCB10Q9NRK6 738 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RECQL5O94762 991 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RBP3P10745 1247 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KDELC1Q6UW63 502 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 LIX1LQ8IVB5 337 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HERC6Q8IVU3 1022 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 USP7Q93009 1102 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HES6Q96HZ4 224 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PRICKLE1Q96MT3 831 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 C11orf49Q9H6J7 331 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 POMT1Q9Y6A1 747 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NUDT19A8MXV4 375 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PTBP3O95758 552 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 IFNA17P01571 189 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC26A3P40879 764 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 THEMISQ8N1K5 641 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SHKBP1Q8TBC3 707 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PIH1D2Q8WWB5 315 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TAMM41Q96BW9 452 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C1QTNF1Q9BXJ1 281 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 AASSQ9UDR5 926 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 INVSQ9Y283 1065 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 A0A1B0GVG6 124 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RNF212BA8MTL3 300 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MYCLP12524 364 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FASP25445 335 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MAPK10P53779 464 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MVKQ03426 396 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CHRNB3Q05901 458 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 IL18R1Q13478 541 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GPR139Q6DWJ6 353 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FAM92BQ6ZTR7 304 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CYP4V2Q6ZWL3 525 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ECSITQ9BQ95 431 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC19A3Q9BZV2 496 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC7A5P2Q9GIP4 190 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FANCFQ9NPI8 374 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ENTPD7Q9NQZ7 604 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C19orf12Q9NSK7 152 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 DBX1A6NMT0 343 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CD6P30203 668 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 KCNMA1Q12791 1236 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 USP10Q14694 798 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FAM47AQ5JRC9 791 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SWSAP1Q6NVH7 229 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MOSPD2Q8NHP6 518 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SGTBQ96EQ0 304 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PTPN22Q9Y2R2 807 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HEATR9A2RTY3 570 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 THRBP10828 461 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CRKP46108 304 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ARFIP1P53367 373 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ADAM15Q13444 863 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 OXA1LQ15070 435 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NOMO2Q5JPE7 1267 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SAMD4BQ5PRF9 694 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TCTEX1D2Q8WW35 142 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RC3H2Q9HBD1 1191 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 WHRNQ9P202 907 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RIC1Q4ADV7 1423 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NPIPA2E9PIF3 369 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TBCELQ5QJ74 424 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 STXBP5Q5T5C0 1151 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TTC7BQ86TV6 843 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC9B2Q86UD5 537 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CREG2Q8IUH2 290 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CCDC60Q8IWA6 550 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C10orf53Q8N6V4 93 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ZFP28Q8NHY6 868 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SMG7Q92540 1137 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SERAC1Q96JX3 654 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NAT9Q9BTE0 207 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ADPRHL2Q9NX46 363 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms