RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 MAGP20916 626 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RECQLP46063 649 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 POU4F1Q01851 419 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RAD51Q06609 339 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 MSLNQ13421 630 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 NADK2Q4G0N4 442 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SGO1Q5FBB7 561 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 BLOC1S5Q8TDH9 187 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SPATA17Q96L03 361 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 THUMPD3Q9BV44 507 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 ADAM7Q9H2U9 754 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 CNGB3Q9NQW8 809 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ADARB2Q9NS39 739 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 SLC8A2Q9UPR5 921 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 MYOCOSA0A1B0GUC4 107 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 BCLAF3A2AJT9 711 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 HDAC3O15379 428 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RECQL4O94761 1208 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 WDR47O94967 919 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ACAT1P24752 427 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 GSSP48637 474 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 RNF145Q96MT1 663 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SLC25A23Q9BV35 468 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RERGLQ9H628 205 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 C6orf203Q9P0P8 240 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 DSEQ9UL01 958 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 CILPO75339 1184 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 LTFP02788 710 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 AKAP5P24588 427 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 CCR1P32246 355 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 HK2P52789 917 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ACTR3P61158 418 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 XIAPP98170 497 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SPIDRQ14159 915 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SNX17Q15036 470 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SAMD4BQ5PRF9 694 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 EGFLAMQ63HQ2 1017 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ZNF470Q6ECI4 717 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 PRMT9Q6P2P2 845 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SPATA6LQ8N4H0 392 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 LRRC52Q8N7C0 313 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 PLD5Q8N7P1 536 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SLC35B2Q8TB61 432 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RPRD1AQ96P16 312 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 OMDQ99983 421 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 ROGDIQ9GZN7 287 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 PTTG2Q9NZH5 202 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 TRMT6Q9UJA5 497 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 NCF1BA6NI72 391 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 NCF1CA8MVU1 366 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 NCF1P14598 390 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 CHRM3P20309 590 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 PIK3R1P27986 724 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 SLC5A3P53794 718 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 DGKZQ13574 1117 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 INSCQ1MX18 579 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 EDEM1Q92611 657 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 UBAP1Q9NZ09 502 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 FAM8A1Q9UBU6 413 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 MAFBQ9Y5Q3 323 aaPredicted RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 ATP6AP2A0A1C7CYW4 349 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RGSL1A5PLK6 1076 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 TIPRLO75663 272 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 ATP6AP2O75787 350 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 TSPAN8P19075 237 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 LRPAP1P30533 357 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 ICAM3P32942 547 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RENBPP51606 427 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RAD23AP54725 363 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 DEFA1P59665 94 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 DEFA3P59666 94 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PSME3P61289 254 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RALGDSQ12967 914 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 NIPA2Q8N8Q9 360 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 HPS1Q92902 700 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CD101Q93033 1021 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PANX3Q96QZ0 392 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 NOL11Q9H8H0 719 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 ABI2Q9NYB9 513 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 POMPQ9Y244 141 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RAP2CQ9Y3L5 183 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 STX7O15400 261 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 CBFA2T3O75081 653 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 VPS26AO75436 327 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 FKBP9O95302 570 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 HOXB8P17481 243 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 GAD2Q05329 585 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 KLF10Q13118 480 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 VEPH1Q14D04 833 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 POLD3Q15054 466 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms