RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 FCRL2Q96LA5 508 aaPredicted RBP15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 TTC3P53804 2025 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 E9PBE3 544 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 TIMM44O43615 452 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 KLHL41O60662 606 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 KPNA6O60684 536 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 CIB2O75838 187 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 KRT34O76011 436 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ASGR1P07306 291 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 PDHA1P08559 390 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 CYBAP13498 195 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 MPP1Q00013 466 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 USP10Q14694 798 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 PDPK2PQ6A1A2 396 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 MRPL10Q7Z7H8 261 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 DENND6AQ8IWF6 608 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SPATA6LQ8N4H0 392 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 DNAJC9Q8WXX5 260 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SCYL1Q96KG9 808 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 TBL1YQ9BQ87 522 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 CYP4F11Q9HBI6 524 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 LRRC42Q9Y546 428 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 NEBLO76041 1014 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 TM7SF2O76062 418 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 VAPBO95292 243 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 MPOP05164 745 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 AOC1P19801 751 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ABL2P42684 1182 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 COG7P83436 770 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 CTBP1Q13363 440 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 LPIN1Q14693 890 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 DNAL1Q4LDG9 190 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 C1orf146Q5VVC0 180 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC41A1Q8IVJ1 513 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 DPF3Q92784 378 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ISL2Q96A47 359 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 PANX3Q96QZ0 392 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 PKMYT1Q99640 499 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 NMRK2Q9NPI5 230 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 ABI2Q9NYB9 513 aaPredicted RBP15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC7A8Q9UHI5 535 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 TRPM7Q96QT4 1865 aa15.14■□□□□ 0.01
VIPAS39-202ENST00000343765 MAGEB16A2A368 324 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 NVLO15381 856 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 MAGEC1O60732 1142 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 CHRNGP07510 517 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 HARS2P49590 506 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 RAP1GDS1P52306 607 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TUSC3Q13454 348 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SEPT6Q14141 434 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TBCCQ15814 346 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 PCSK7Q16549 785 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TSNAXIP1Q2TAA8 658 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC39A12Q504Y0 691 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 RALGPS1Q5JS13 557 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SIKE1Q9BRV8 207 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 OSBPL2Q9H1P3 480 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 COG4Q9H9E3 785 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 NMUR1Q9HB89 426 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TRMT13Q9NUP7 481 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TLK1Q9UKI8 766 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 NOD1Q9Y239 953 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 ZNF195O14628 629 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 DCXO43602 365 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 IGHA2P01877 340 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 CCR1P32246 355 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 VHLP40337 213 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 TUBP50607 506 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC34A1Q06495 639 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC9B1Q4ZJI4 515 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 NOMO2Q5JPE7 1267 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 ESRP1Q6NXG1 681 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 LRRC74BQ6ZQY2 392 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 C14orf80Q86SX3 495 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 CLEC14AQ86T13 490 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 PHTF2Q8N3S3 785 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 KCTD4Q8WVF5 259 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 DNAJC28Q9NX36 388 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 ARHGEF38Q9NXL2 777 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 G3BP2Q9UN86 482 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 PCDHB12Q9Y5F1 795 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 GOLGA8QA0A0J9YX86 632 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 A0A1W2PQH9 124 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 GOLGA8OA6NCC3 632 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 GOLGA8NF8WBI6 632 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 NEMP1O14524 444 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 B4GALT3O60512 393 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 MAFKO60675 156 aa15.13■□□□□ 0.01
VIPAS39-202ENST00000343765 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms