RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DLGAP1O14490 977 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ADAM23O75077 832 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 C2P06681 752 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NELFEP18615 380 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 DNAJB1P25685 340 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SDC4P31431 198 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ATXN3P54252 364 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SP4Q02446 784 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 INCA1Q0VD86 236 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 C6orf10Q5SRN2 563 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NIPAL1Q6NVV3 410 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 C8orf82Q6P1X6 216 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 SCYL2Q6P3W7 929 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CHSY3Q70JA7 882 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 COLGALT2Q8IYK4 626 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CENPSQ8N2Z9 138 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 COLGALT1Q8NBJ5 622 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FAM156AQ8NDB6 213 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ZSCAN18Q8TBC5 510 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 URGCPQ8TCY9 931 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 NSUN6Q8TEA1 469 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TMA16Q96EY4 203 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FCRL3Q96P31 734 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 CSPG4P5Q96PW8 444 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TDRD1Q9BXT4 1180 aaKnown RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ACE2Q9BYF1 805 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 DNAI2Q9GZS0 605 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 TRPV6Q9H1D0 765 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FAM124BQ9H5Z6 455 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 PTPRHQ9HD43 1115 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 RNF146Q9NTX7 359 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 KIAA1522Q9P206 1035 aaPredicted RBP9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ZDHHC2Q9UIJ5 367 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 ANKRD6Q9Y2G4 727 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 FADS3Q9Y5Q0 445 aa9.83□□□□□ -0.84
HOXA1-201ENST00000343060 LCTP09848 1927 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 E2F8A0AVK6 867 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CLRN2A0PK11 232 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HEATR9A2RTY3 570 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 IQCA1LA6NCM1 817 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 E7ENX8 843 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 H0YIN7 160 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 E2F6O75461 281 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 SULT1C4O75897 302 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CSPG5O95196 566 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 JUNP05412 331 aaKnown RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TFPTP0C1Z6 253 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 OCM2P0CE71 109 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 OCMP0CE72 109 aaPredicted RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 FUT4P22083 530 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PTPN9P43378 593 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 GRIA4P48058 902 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 ITGA7Q13683 1181 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 LRP8Q14114 963 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 BCL2A1Q16548 175 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 MOGQ16653 247 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 FASTKD5Q7L8L6 764 aaKnown RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 EEPD1Q7L9B9 569 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 ERMP1Q7Z2K6 904 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 STRA8Q7Z7C7 330 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM135Q86UB9 458 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 C1orf127Q8N9H9 656 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 UBA3Q8TBC4 463 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 AGR3Q8TD06 166 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 LPGAT1Q92604 370 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CIB1Q99828 191 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 EFHD1Q9BUP0 239 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 FTHL17Q9BXU8 183 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 C20orf96Q9NUD7 363 aaPredicted RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 B3GNT3Q9Y2A9 372 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 LOC285556D6RIA3 1793 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HTR3EA5X5Y0 456 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM247A6NEH6 219 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TARM1B6A8C7 271 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PIK3R2O00459 728 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 SOCS2O14508 198 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 SDHDO14521 159 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TIMM44O43615 452 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 GRAP2O75791 330 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 IL18RAPO95256 599 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PRKCBP05771 671 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 C7P10643 843 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 FGFR3P22607 806 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HOXD12P35452 270 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HADHAP40939 763 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 NME5P56597 212 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 C21orf59P57076 290 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 GRSF1Q12849 480 aaKnown RBP eCLIP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 DLG2Q15700 870 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 NANOGP8Q6NSW7 305 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 MPZL3Q6UWV2 235 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HACD2Q6Y1H2 254 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 SLC15A3Q8IY34 581 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 KDM1BQ8NB78 822 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 DDHD1Q8NEL9 900 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 HMGCLL1Q8TB92 370 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 STYXQ8WUJ0 223 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CENPIQ92674 756 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms