RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CRYL1Q9Y2S2 319 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 LRP6O75581 1613 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 CHADO15335 359 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PCNAP12004 261 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 CRABP2P29373 138 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 GPC1P35052 558 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 MAXP61244 160 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PLIN5Q00G26 463 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PRKAA1Q13131 559 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 XRCC4Q13426 336 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 BNC2Q6ZN30 1099 aaPredicted RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 CCNT2O60583 730 aaKnown RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 MAPK1P28482 360 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 FMO4P31512 558 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 ABL2P42684 1182 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 RCN1Q15293 331 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PHKG1Q16816 387 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 C16orf87Q6PH81 154 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PRSS55Q6UWB4 352 aaPredicted RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 SCUBE1Q8IWY4 988 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF296Q8WUU4 475 aaPredicted RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 LGMNQ99538 433 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 DEC1Q9P2X7 70 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 HNRNPRO43390 633 aaKnown RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 ADRA1BP35368 520 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 BBS12Q6ZW61 710 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 METTL3Q86U44 580 aaKnown RBP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 PCED1BQ96HM7 432 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 ASB8Q9H765 288 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 TBC1D14Q9P2M4 693 aa15.29■□□□□ 0.04
PCDHB13-201ENST00000341948 MYBPHLA2RUH7 354 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TPST1O60507 370 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 ETS1P14921 441 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 STRADAQ7RTN6 431 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 BTN2A3PQ96KV6 586 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PCDHB18PQ96TA0 734 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 ACOX2Q99424 681 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 GNG14A0A1W2PPG7 69 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PSMA4P25789 261 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PFKPQ01813 784 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 CDC16Q13042 620 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 ZC3H12BQ5HYM0 836 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 HORMAD1Q86X24 394 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 NETO2Q8NC67 525 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 IL22Q9GZX6 179 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 RNF186Q9NXI6 227 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 SLC10A3P09131 477 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TAS2R40P59535 323 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 INSCQ1MX18 579 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 LRRN4Q8WUT4 740 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 UNC93B1Q9H1C4 597 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 MIR1-1HGQ9H1L0 117 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TCF7L2Q9NQB0 619 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 THAP1Q9NVV9 213 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 KIAA1522Q9P206 1035 aaPredicted RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 RAD51BO15315 384 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 TKTP29401 623 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 CORO1AP31146 461 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PBX3P40426 434 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 RFX3P48380 749 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 SLC1A6P48664 564 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PRKAA2P54646 552 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 PCID2Q5JVF3 399 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 FAM46CQ5VWP2 391 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 FAM228AQ86W67 206 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 OTULINQ96BN8 352 aa15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 REXO2Q9Y3B8 237 aaKnown RBP15.28■□□□□ 0.04
PCDHB13-201ENST00000341948 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 FLT3P36888 993 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 CCNG1P51959 295 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 WLSQ5T9L3 541 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 ALLCQ8N6M5 410 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 AGO1Q9UL18 857 aaKnown RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 MGAT4DA6NG13 374 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 MAP2K7O14733 419 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 PTPN4P29074 926 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 FUT11Q495W5 492 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 LRRC23Q53EV4 343 aaPredicted RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 DPEP3Q9H4B8 488 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 CATSPERZQ9NTU4 200 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 UBDO15205 165 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 CLDN11O75508 207 aa15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
PCDHB13-201ENST00000341948 RPL22P35268 128 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms