RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 RBM12Q9NTZ6 932 aaKnown RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 UBA2Q9UBT2 640 aaPredicted RBP18.24■□□□□ 0.51
SDCBP2-201ENST00000339987 DLDP09622 509 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 DRD1P21728 446 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 RBL1P28749 1068 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 CLCN6P51797 869 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 IFI35P80217 286 aaPredicted RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 LMNB2Q03252 620 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 HNRNPDQ14103 355 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 RFTN1Q14699 578 aaPredicted RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 E2F5Q15329 346 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 INO80DQ53TQ3 878 aaPredicted RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 TMCO4Q5TGY1 634 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 HEATR6Q6AI08 1181 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 TTC27Q6P3X3 843 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 METTL3Q86U44 580 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 LRRN4Q8WUT4 740 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 NSMCE1Q8WV22 266 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 HTR3CQ8WXA8 447 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 FAM3CQ92520 227 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 RUNDC3BQ96NL0 473 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 CIPCQ9C0C6 399 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 USP29Q9HBJ7 922 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 SLC25A13Q9UJS0 675 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 ZNF148Q9UQR1 794 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 HS3ST2Q9Y278 367 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 STARD13Q9Y3M8 1113 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 CD160O95971 181 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 SRPRAP08240 638 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 STIP1P31948 543 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 CTSOP43234 321 aaPredicted RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 SERPINH1P50454 418 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 GRSF1Q12849 480 aaKnown RBP eCLIP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 PON2Q15165 354 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 FSTL4Q6MZW2 842 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 CCDC137Q6PK04 289 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 B4GALNT4Q76KP1 1039 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 TEX26Q8N6G2 289 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 KDM1BQ8NB78 822 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 ATL2Q8NHH9 583 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 UCMAQ8WVF2 138 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 RTP4Q96DX8 246 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 SHDQ96IW2 340 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 VAT1Q99536 393 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 IL12RB2Q99665 862 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 TMEM121Q9BTD3 319 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 DDX47Q9H0S4 455 aaKnown RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 C10orf88Q9H8K7 445 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 PCYOX1Q9UHG3 505 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 FEZ2Q9UHY8 353 aaPredicted RBP18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 MUTYHQ9UIF7 546 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 FBXL21Q9UKT6 434 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 ERVW-1Q9UQF0 538 aa18.23■□□□□ 0.51
SDCBP2-201ENST00000339987 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 KCNN4O15554 427 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CTAGE8P0CG41 777 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CCNB1P14635 433 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 KCNJ1P48048 391 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 NUMBP49757 651 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 RENBPP51606 427 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 LBRQ14739 615 aaKnown RBP18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 LINGO4Q6UY18 593 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 ZNF852Q6ZMS4 543 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CTAGE4Q8IX94 777 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 ALLCQ8N6M5 410 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 KCNV2Q8TDN2 545 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 GRK7Q8WTQ7 553 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 EZH1Q92800 747 aaPredicted RBP18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 SLCO2A1Q92959 643 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 MRGPRX3Q96LB0 322 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 AMACRQ9UHK6 382 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 CA14Q9ULX7 337 aa18.22■□□□□ 0.51
SDCBP2-201ENST00000339987 F5P12259 2224 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 K7EQS6 105 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 KCNK1O00180 336 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 RNF103O00237 685 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 NPC1O15118 1278 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 MT-CO1P00395 513 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 PTPN3P26045 913 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 STARD6P59095 220 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 PTPRNQ16849 979 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 MARC1Q5VT66 337 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 LEKR1Q6ZMV7 388 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 SFTPA1Q8IWL2 248 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 CCDC105Q8IYK2 499 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 BBS5Q8N3I7 341 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 SH2D3CQ8N5H7 860 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 FAM71DQ8N9W8 422 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 CYB5D2Q8WUJ1 264 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 SORCS1Q8WY21 1168 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 CCDC114Q96M63 670 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms