RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 EPS15L1Q9UBC2 864 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 SLC27A5Q9Y2P5 690 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ABCA3Q99758 1704 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 LRIG2O94898 1065 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 PIGRP01833 764 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CPB1P15086 417 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ADRA1BP35368 520 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 SERPINB8P50452 374 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 EGFL6Q8IUX8 553 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 CFAP52Q8N1V2 620 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 MIER2Q8N344 545 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 PARP8Q8N3A8 854 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
USP1-201ENST00000339950 POMKQ9H5K3 350 aa12.14□□□□□ -0.47
USP1-201ENST00000339950 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 BAIAP3O94812 1187 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 THP07101 528 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 CCDC166P0CW27 439 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 MGAT5BQ3V5L5 792 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
USP1-201ENST00000339950 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 OR6Y1Q8NGX8 325 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 KLHL4Q9C0H6 718 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 A0A0U1RQS6 177 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 F8W810 466 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 ADCY6O43306 1168 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 SCNN1BP51168 640 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 SEMG2Q02383 582 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 CDC16Q13042 620 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 KLF10Q13118 480 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 TEDDM1Q5T9Z0 273 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 TAS2R42Q7RTR8 314 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 MAPK15Q8TD08 544 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 FNIP1Q8TF40 1166 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 TUBGCP3Q96CW5 907 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 MRPL1Q9BYD6 325 aaKnown RBP12.13□□□□□ -0.47
USP1-201ENST00000339950 HACD3Q9P035 362 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 IPPQ9Y573 584 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 FAM95CA0A1B0GW59 222 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 KCNU1A8MYU2 1149 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 LYNP07948 512 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 PSMC3P17980 439 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 COL9A2Q14055 689 aaPredicted RBP12.13□□□□□ -0.47
USP1-201ENST00000339950 GPRIN1Q7Z2K8 1008 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 PSTKQ8IV42 348 aaKnown RBP12.13□□□□□ -0.47
USP1-201ENST00000339950 PPHLN1Q8NEY8 458 aaKnown RBP12.13□□□□□ -0.47
USP1-201ENST00000339950 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 PCED1BQ96HM7 432 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 MPP4Q96JB8 637 aa12.13□□□□□ -0.47
USP1-201ENST00000339950 TM7SF2O76062 418 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 ATG7O95352 703 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 ACADSBP45954 432 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 HUNKP57058 714 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 GPC2Q8N158 579 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 KYQ8NBH2 561 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 TINF2Q9BSI4 451 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 SMPD4Q9NXE4 827 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 ZNF839A8K0R7 811 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 AURKAO14965 403 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 WFS1O76024 890 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 PFKMP08237 780 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 GNAZP19086 355 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 NOS2P35228 1153 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 MFSD10Q14728 455 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 MAP3K21Q5TCX8 1036 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 KLC3Q6P597 504 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 HNRNPRO43390 633 aaKnown RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 SERPINA6P08185 405 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 XRCC1P18887 633 aaPredicted RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 PIK3R1P27986 724 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 CRHR1P34998 444 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 CD86P42081 329 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
USP1-201ENST00000339950 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 C10orf120Q5SQS8 335 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 DHDDSQ86SQ9 333 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 BPIFA1Q9NP55 256 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 CDH22Q9UJ99 828 aa12.12□□□□□ -0.47
USP1-201ENST00000339950 POMPQ9Y244 141 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms