RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CMC1Q7Z7K0 106 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 XYLT1Q86Y38 959 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SLC7A14Q8TBB6 771 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 WNK4Q96J92 1243 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 FEM1CQ96JP0 617 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CPXM1Q96SM3 734 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CGRRF1Q99675 332 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 APBA2Q99767 749 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 PDGFDQ9GZP0 370 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 DRC3Q9H069 523 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 EHD1Q9H4M9 534 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 PDLIM7Q9NR12 457 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ACSS2Q9NR19 701 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CD300AQ9UGN4 299 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SFMBT1Q9UHJ3 866 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 RAP2CQ9Y3L5 183 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 COPG1Q9Y678 874 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 QSER1Q2KHR3 1735 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 PRORSD1PA6NEY8 169 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 NRP1O14786 923 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CLPXO76031 633 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 IL18RAPO95256 599 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 LDHAP00338 332 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 GH2P01242 217 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 HMGCRP04035 888 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 JUNP05412 331 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 PDK2Q15119 407 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SF3B4Q15427 424 aaKnown RBP eCLIP9.56□□□□□ -0.884e-7■■■■■ 38
NECAP1-201ENST00000339754 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 BTLAQ7Z6A9 289 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CBR4Q8N4T8 237 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SP7Q8TDD2 431 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CDKL2Q92772 493 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 HPS1Q92902 700 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ATP6V0A1Q93050 837 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 DCPSQ96C86 337 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 TUBA1CQ9BQE3 449 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ADI1Q9BV57 179 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SIAEQ9HAT2 523 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ZFYVE28Q9HCC9 887 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SNX15Q9NRS6 342 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 POU2F3Q9UKI9 436 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 TNS1Q9HBL0 1735 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 KCNU1A8MYU2 1149 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 KDM1AO60341 852 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 JRKO75564 520 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 RSL1D1O76021 490 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 BCL10O95999 233 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 IDUAP35475 653 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 POLR2IP36954 125 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 HSD17B4P51659 736 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TMBIM6P55061 237 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 PACRGLQ8N7B6 248 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 OR13F1Q8NGS4 319 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 STON2Q8WXE9 905 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ARNTL2Q8WYA1 636 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ISL2Q96A47 359 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 CAMKK2Q96RR4 588 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TCF12Q99081 682 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 DEFB129Q9H1M3 183 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 LHX5Q9H2C1 402 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 VTA1Q9NP79 307 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ARMC1Q9NVT9 282 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 OXSMQ9NWU1 459 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 DNMT3BQ9UBC3 853 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ZDHHC2Q9UIJ5 367 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ERVK-11Q9UQG0 969 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SCN4AP35499 1836 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 PTPRFP10586 1907 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SAC3D1A6NKF1 404 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 STBD1O95210 358 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 CLIC3O95833 236 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 EIF2S1P05198 315 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TGM2P21980 687 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 NEK2P51955 445 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 MAPK10P53779 464 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 BCAR1P56945 870 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 RALGDSQ12967 914 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 PPIL2Q13356 520 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 NAB1Q13506 487 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 LRP8Q14114 963 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SMAD1Q15797 465 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ARL13BQ3SXY8 428 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ARL13AQ5H913 290 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 C6orf10Q5SRN2 563 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF618Q5T7W0 954 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 INTS11Q5TA45 600 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 STYK1Q6J9G0 422 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms