RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 THAP2Q9H0W7 228 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 RETREG1Q9H6L5 497 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 NOL6Q9H6R4 1146 aaKnown RBP15.62■□□□□ 0.09
PRKN-201ENST00000338468 FSCN3Q9NQT6 498 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 GPATCH2LQ9NWQ4 482 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 MYO1AQ9UBC5 1043 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 SARDHQ9UL12 918 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 PCDH15Q96QU1 1955 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 PI4KAP42356 2102 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 A0A1W2PP55 124 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 RNASEH1O60930 286 aaKnown RBP15.61■□□□□ 0.09
PRKN-201ENST00000338468 ZNF821O75541 412 aaPredicted RBP15.61■□□□□ 0.09
PRKN-201ENST00000338468 DPP6P42658 865 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 PSMD8P48556 350 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 MAPKAPK2P49137 400 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 AIF1P55008 147 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 FOXC1Q12948 553 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 ASTE1Q2TB18 679 aaPredicted RBP15.61■□□□□ 0.09
PRKN-201ENST00000338468 TTC31Q49AM3 519 aaPredicted RBP15.61■□□□□ 0.09
PRKN-201ENST00000338468 ACCSLQ4AC99 568 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 DCAF12L1Q5VU92 463 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 SLC23A3Q6PIS1 610 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 USP30Q70CQ3 517 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 C1orf216Q8TAB5 229 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 FOXJ1Q92949 421 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 ARHGEF2Q92974 986 aaKnown RBP15.61■□□□□ 0.09
PRKN-201ENST00000338468 TRIM11Q96F44 468 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 SPON2Q9BUD6 331 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 BTBD1Q9H0C5 482 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 NEUROG2Q9H2A3 272 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 CAPN10Q9HC96 672 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 ATP13A1Q9HD20 1204 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 FBXL12Q9NXK8 326 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 SCML1Q9UN30 329 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 ACTL7AQ9Y615 435 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 SLCO1B1Q9Y6L6 691 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 SCINQ9Y6U3 715 aa15.61■□□□□ 0.09
PRKN-201ENST00000338468 TMEM8BA6NDV4 472 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 C4orf47A7E2U8 309 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 RNF103O00237 685 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 CBX4O00257 560 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 CDX4O14627 284 aaPredicted RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 LRCH4O75427 683 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 SEMA4FO95754 770 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 CYP1A2P05177 515 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 CTSLP07711 333 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 C5AR1P21730 350 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 MIPP30301 263 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 DRD3P35462 400 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 EIF4A3P38919 411 aaKnown RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 DUOXA1Q1HG43 343 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 ALKBH5Q6P6C2 394 aaKnown RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 VPS36Q86VN1 386 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 RTL3Q8N8U3 475 aaKnown RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 KDF1Q8NAX2 398 aaPredicted RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 OR2A12Q8NGT7 310 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 FAM131CQ96AQ9 280 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 ARHGEF26Q96DR7 871 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 ORAI3Q9BRQ5 295 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 SNRNP25Q9BV90 132 aaKnown RBP15.6■□□□□ 0.09
PRKN-201ENST00000338468 PCED1AQ9H1Q7 454 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 SGK2Q9HBY8 427 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 PCSK1NQ9UHG2 260 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 PPM1HQ9ULR3 514 aa15.6■□□□□ 0.09
PRKN-201ENST00000338468 WASH4PA8MWX3 477 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 PLK4O00444 970 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 GIPC1O14908 333 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 MCF2LO15068 1137 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 CREB3O43889 395 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 ADH1BP00325 375 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 IL1BP01584 269 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 IGHV4-34P06331 123 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 SERPINF2P08697 491 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 TCF4P15884 667 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 IL1R2P27930 398 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 EPHB2P29323 1055 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 SERPINH1P50454 418 aaKnown RBP15.59■□□□□ 0.09
PRKN-201ENST00000338468 CLCN6P51797 869 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 GALCP54803 685 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 GFPT1Q06210 699 aaPredicted RBP15.59■□□□□ 0.09
PRKN-201ENST00000338468 TRIM14Q14142 442 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 WDR45BQ5MNZ6 344 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 CCDC122Q5T0U0 273 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 SYCP2LQ5T4T6 812 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 C22orf39Q6P5X5 142 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 SARM1Q6SZW1 724 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 RGL4Q8IZJ4 473 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 HDDC3Q8N4P3 179 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 CHST14Q8NCH0 376 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 OR8K1Q8NGG5 319 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 CEP76Q8TAP6 659 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 BTBD6Q96KE9 485 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 KCTD15Q96SI1 283 aaPredicted RBP15.59■□□□□ 0.09
PRKN-201ENST00000338468 KLC2Q9H0B6 622 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 MAGEH1Q9H213 219 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 MRPL47Q9HD33 250 aaKnown RBP15.59■□□□□ 0.09
PRKN-201ENST00000338468 SLC6A14Q9UN76 642 aa15.59■□□□□ 0.09
PRKN-201ENST00000338468 AP4E1Q9UPM8 1137 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms