RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SMAPO00193 183 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 STX7O15400 261 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SPAG6O75602 509 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 RHOBTB1O94844 696 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 KLHL2O95198 593 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ASGR1P07306 291 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ZBTB48P10074 688 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 NOS2P35228 1153 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CXCR3P49682 368 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CDK7P50613 346 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 IMPG1Q17R60 797 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 POM121L1PQ3SYA9 428 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SLC44A4Q53GD3 710 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SCARA3Q6AZY7 606 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 C16orf87Q6PH81 154 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 TPGS1Q6ZTW0 290 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ARPINQ7Z6K5 226 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ZC3H3Q8IXZ2 948 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ENDOVQ8N8Q3 282 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SCAMP5Q8TAC9 235 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 NAT14Q8WUY8 206 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 UPF1Q92900 1129 aaKnown RBP eCLIP6.59□□□□□ -1.354e-7■■■□□ 15.4
HMG20A-201ENST00000336216 THAP11Q96EK4 314 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 SMARCD1Q96GM5 515 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 CDRT15Q96T59 188 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 TM6SF2Q9BZW4 377 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 TRMT13Q9NUP7 481 aaKnown RBP6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ATXN10Q9UBB4 475 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 LNPEPQ9UIQ6 1025 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 VPS28Q9UK41 221 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 DOLKQ9UPQ8 538 aa6.59□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 MANSC4A6NHS7 340 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 ABLIM1O14639 778 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 GSTA4O15217 222 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 TM7SF2O76062 418 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 MBL2P11226 248 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 STMN1P16949 149 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 GRK4P32298 578 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 SLC1A6P48664 564 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 CAPRIN1Q14444 709 aaKnown RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 TCEA2Q15560 299 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 FUT11Q495W5 492 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 SFT2D3Q587I9 215 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 PPM1JQ5JR12 505 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 PTRHD1Q6GMV3 140 aaKnown RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 OR52E8Q6IFG1 317 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 RGMBQ6NW40 437 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 NET1Q7Z628 596 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 DDX53Q86TM3 631 aaKnown RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 LDB1Q86U70 411 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 BANPQ8N9N5 519 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 OR6K2Q8NGY2 324 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 SPATA22Q8NHS9 363 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 MYLPFQ96A32 169 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 AZIN2Q96A70 460 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 MRPL46Q9H2W6 279 aaKnown RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 LIN28AQ9H9Z2 209 aaKnown RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 ACOT9Q9Y305 439 aa6.59□□□□□ -1.36
HMG20A-201ENST00000336216 COL2A1P02458 1487 aaPredicted RBP6.59□□□□□ -1.36
HMG20A-201ENST00000336216 CLUHO75153 1309 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PTPRZ1P23471 2315 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 YJEFN3A6XGL0 299 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TRIM16O95361 564 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GMPRP36959 345 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 FDFT1P37268 417 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CHN2P52757 468 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 HADHBP55084 474 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TBX4P57082 545 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ARHGAP1Q07960 439 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MAPRE1Q15691 268 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ANKRD20A4Q4UJ75 823 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SYPL2Q5VXT5 272 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CDHR3Q6ZTQ4 885 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 OTOP3Q7RTS5 596 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 KCNMB4Q86W47 210 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PCSK9Q8NBP7 692 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 NPLOC4Q8TAT6 608 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CXorf38Q8TB03 319 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 DENND1AQ8TEH3 1009 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CRYGNQ8WXF5 182 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 NR1H4Q96RI1 486 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ILKAPQ9H0C8 392 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ABCG8Q9H221 673 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MMADHCQ9H3L0 296 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 FZD8Q9H461 694 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 OCEL1Q9H607 264 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 KCNK4Q9NYG8 393 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CD274Q9NZQ7 290 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 THEGQ9P2T0 379 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PNMA8BQ9ULN7 279 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TRPV2Q9Y5S1 764 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SNX13Q9Y5W8 968 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms